RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 KDM6BO15054 1643 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 A0A1B0GW64 132 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 C9JAW5 83 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 DEGS1O15121 323 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 TNFSF15O95150 251 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 APOC1P02654 83 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 PPDPFLQ8WWR9 84 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 TAS2R8Q9NYW2 309 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 DNAJC15Q9Y5T4 150 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 ANK2Q01484 3957 aa0.21□□□□□ -2.38
SMARCE1-219ENST00000583294 MAP2P11137 1827 aaKnown RBP0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 TEX49A0A1B0GTD5 131 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 A0A1B0GX51 115 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 NBEAP1P0C6P0 100 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 SNX29P2Q8IUI4 249 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 TCTE3Q8IZS6 198 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 COA4Q9NYJ1 87 aa0.2□□□□□ -2.38
SMARCE1-219ENST00000583294 F5P12259 2224 aa0.19□□□□□ -2.38
SMARCE1-219ENST00000583294 GPR98Q8WXG9 6306 aa0.19□□□□□ -2.38
SMARCE1-219ENST00000583294 CXorf51AA0A1B0GTR3 108 aa0.19□□□□□ -2.38
SMARCE1-219ENST00000583294 VMO1Q7Z5L0 202 aa0.19□□□□□ -2.38
SMARCE1-219ENST00000583294 HIGD1AQ9Y241 93 aa0.19□□□□□ -2.38
SMARCE1-219ENST00000583294 PYYP10082 97 aa0.18□□□□□ -2.38
SMARCE1-219ENST00000583294 HLA-DRB4P13762 266 aa0.18□□□□□ -2.38
SMARCE1-219ENST00000583294 VPS25Q9BRG1 176 aa0.18□□□□□ -2.38
SMARCE1-219ENST00000583294 HLA-DRB4X5D2U9 266 aa0.18□□□□□ -2.38
SMARCE1-219ENST00000583294 POLQO75417 2590 aa0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 ZNF670-ZNF695F2Z2N8 137 aa0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 PLXNA2O75051 1894 aa0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 NOP16Q9Y3C1 178 aaKnown RBP0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 F8P00451 2351 aa0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 CASZ1Q86V15 1759 aa0.17□□□□□ -2.38
SMARCE1-219ENST00000583294 CCDC171Q6TFL3 1326 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 IGSF10Q6WRI0 2623 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 SCTP09683 121 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 CLLU1Q5K131 121 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 PPP1R1CQ8WVI7 109 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 BET1LQ9NYM9 111 aa0.16□□□□□ -2.38
SMARCE1-219ENST00000583294 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.38
SMARCE1-219ENST00000583294 NCOR2Q9Y618 2525 aa0.15□□□□□ -2.39
SMARCE1-219ENST00000583294 TCRBV3S1A0A5B6 114 aa0.15□□□□□ -2.39
SMARCE1-219ENST00000583294 RBP4P02753 201 aa0.15□□□□□ -2.39
SMARCE1-219ENST00000583294 ELOF1P60002 83 aaKnown RBP0.15□□□□□ -2.39
SMARCE1-219ENST00000583294 B2MP61769 119 aa0.15□□□□□ -2.39
SMARCE1-219ENST00000583294 TRAV12-2A0A075B6T6 113 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 F2Z2F3 143 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 SLC25A6P12236 298 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 CCDC153Q494R4 210 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 TAC4Q86UU9 113 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 ATP6V0E2Q8NHE4 81 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 DYNLRB2Q8TF09 96 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
SMARCE1-219ENST00000583294 BORCS7-ASMTA0A0B4J1R7 106 aa0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 TRAV2A0A0B4J234 112 aa0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 EMX2Q04743 252 aa0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 MAGOHBQ96A72 148 aaKnown RBP0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 KIF13AQ9H1H9 1805 aa0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 TNS1Q9HBL0 1735 aaKnown RBP0.13□□□□□ -2.39
SMARCE1-219ENST00000583294 ARAP1Q96P48 1450 aa0.12□□□□□ -2.39
SMARCE1-219ENST00000583294 OTOGQ6ZRI0 2925 aa0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 MCRIP1C9JLW8 97 aa0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 OR2T2Q6IF00 324 aa0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 IFI27L1Q96BM0 104 aa0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 CADP27708 2225 aa0.11□□□□□ -2.39
SMARCE1-219ENST00000583294 CYP2G1PQ6ZSU1 146 aa0.1□□□□□ -2.39
SMARCE1-219ENST00000583294 LSM2Q9Y333 95 aaKnown RBP0.1□□□□□ -2.39
SMARCE1-219ENST00000583294 SPANXA1Q9NS26 97 aa0.09□□□□□ -2.4
SMARCE1-219ENST00000583294 SPANXCQ9NY87 97 aa0.09□□□□□ -2.4
SMARCE1-219ENST00000583294 UHRF1BP1LA0JNW5 1464 aa0.09□□□□□ -2.4
SMARCE1-219ENST00000583294 J3QLW9 94 aa0.08□□□□□ -2.4
SMARCE1-219ENST00000583294 YPEL1O60688 119 aa0.08□□□□□ -2.4
SMARCE1-219ENST00000583294 ATP11AUNQ6ZP68 121 aa0.08□□□□□ -2.4
SMARCE1-219ENST00000583294 PTPRMP28827 1452 aa0.08□□□□□ -2.4
SMARCE1-219ENST00000583294 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
SMARCE1-219ENST00000583294 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 SYNJ1O43426 1573 aa0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 SPINK1P00995 79 aa0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 DBIP07108 87 aaKnown RBP0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 BPESC1Q9GZL8 116 aa0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 VIRMAQ69YN4 1812 aaKnown RBP0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 KIAA0100Q14667 2235 aaKnown RBP0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 ZNF142P52746 1687 aaPredicted RBP0.07□□□□□ -2.4
SMARCE1-219ENST00000583294 SOGA1O94964 1423 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 RBAKDNA6NC62 111 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 NPC2P61916 151 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 Q5BKY6 102 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 AIF1LQ9BQI0 150 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 ERG28Q9UKR5 140 aa0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
SMARCE1-219ENST00000583294 NDUFA11Q86Y39 141 aa0.05□□□□□ -2.4
SMARCE1-219ENST00000583294 ERCC6Q03468 1493 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 CDK13Q14004 1512 aaKnown RBP0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 M0R2P5 195 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 COX4I1P13073 169 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 MORN2Q502X0 79 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 MYH13Q9UKX3 1938 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 AHCTF1Q8WYP5 2266 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
SMARCE1-219ENST00000583294 PLXNA1Q9UIW2 1896 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms