RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SOCS3O14543 225 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 IGHV3-23P01764 117 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 XCL1P47992 114 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 ZNF117Q03924 483 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 VMO1Q7Z5L0 202 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 SMIM4Q8WVI0 70 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 PTPRBP23467 1997 aa4.52□□□□□ -1.69
COPS3-216ENST00000579716 NEXMIFQ5QGS0 1516 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 PLCH1Q4KWH8 1693 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 SCN8AQ9UQD0 1980 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 USP32Q8NFA0 1604 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 IGHV5-51A0A0C4DH38 117 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 A0A1B0GWA3 101 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 PRAC2D3DTV9 90 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 SLC25A20O43772 301 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 CGB3P0DN86 165 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 CGB7P0DN87 165 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 MDKP21741 143 aaPredicted RBP4.51□□□□□ -1.69
COPS3-216ENST00000579716 SUPT4H1P63272 117 aaKnown RBP4.51□□□□□ -1.69
COPS3-216ENST00000579716 C2orf83Q53S99 150 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 LYPD5Q6UWN5 251 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 SDIM1Q6ZPB5 146 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 NMES1Q9C002 83 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 TNS1Q9HBL0 1735 aaKnown RBP4.51□□□□□ -1.69
COPS3-216ENST00000579716 ATAD5Q96QE3 1844 aa4.51□□□□□ -1.69
COPS3-216ENST00000579716 MYO5AQ9Y4I1 1855 aaKnown RBP4.5□□□□□ -1.69
COPS3-216ENST00000579716 IGLV3-12A0A075B6K2 115 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 C2orf70A6NJV1 201 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 CPSF4O95639 269 aaKnown RBP4.5□□□□□ -1.69
COPS3-216ENST00000579716 UBE2D3P61077 147 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 UBE2D2P62837 147 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 SYCNQ0VAF6 134 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 SMCR5Q8TEV8 140 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 PPP1R1CQ8WVI7 109 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 ZNF524Q96C55 264 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 STRCP1A6NGW2 1772 aa4.5□□□□□ -1.69
COPS3-216ENST00000579716 NYNRINQ9P2P1 1898 aaKnown RBP4.49□□□□□ -1.69
COPS3-216ENST00000579716 UBR1Q8IWV7 1749 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 PTPRDP23468 1912 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 TRBV7-1A0A0A6YYK4 115 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 IGKV6D-41A0A0C4DH26 115 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 IGHV5-10-1A0A0J9YXX1 117 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 TRBV10-3A0A0K0K1G6 114 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 C11orf94C9JXX5 98 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 BPY2O14599 106 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 IGLV3-25P01717 112 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 C1orf147Q96MC9 270 aaPredicted RBP4.49□□□□□ -1.69
COPS3-216ENST00000579716 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
COPS3-216ENST00000579716 GPATCH8Q9UKJ3 1502 aaKnown RBP4.49□□□□□ -1.69
COPS3-216ENST00000579716 CASP8AP2Q9UKL3 1982 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 ALKQ9UM73 1620 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 A0A0B4J2C4 111 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 A6NED7 52 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 SH2D1AO60880 128 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 LY6HO94772 140 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 PRH1P02810 166 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 HMGN2P05204 90 aaKnown RBP4.48□□□□□ -1.69
COPS3-216ENST00000579716 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 Q8N814 137 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 DSCAML1Q8TD84 2053 aa4.48□□□□□ -1.69
COPS3-216ENST00000579716 EXPH5Q8NEV8 1989 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 TRBV7-3A0A075B6L6 115 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 IGHV1-8P0DP01 117 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 NOVP48745 357 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
COPS3-216ENST00000579716 ZNF826PQ6ZT77 177 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 FAM223AQ8IWN6 122 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 DYNAPQ8N1N2 210 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 FAM167A-AS1Q96KT0 104 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 GCC2Q8IWJ2 1684 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
COPS3-216ENST00000579716 PLXNB3Q9ULL4 1909 aa4.46□□□□□ -1.69
COPS3-216ENST00000579716 ANKRD36CQ5JPF3 1778 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 COL2A1P02458 1487 aaPredicted RBP4.46□□□□□ -1.7
COPS3-216ENST00000579716 C19orf71A6NCJ1 209 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 A8MWP4 228 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 LECT2O14960 151 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 IGLV1-51P01701 117 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 FXYD2P54710 66 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 SSBP1Q04837 148 aaKnown RBP4.46□□□□□ -1.7
COPS3-216ENST00000579716 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 ZNF646O15015 1829 aaPredicted RBP4.46□□□□□ -1.7
COPS3-216ENST00000579716 ARFGEF1Q9Y6D6 1849 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 CPS1P31327 1500 aa4.46□□□□□ -1.7
COPS3-216ENST00000579716 IQGAP1P46940 1657 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 IGLV11-55A0A075B6I3 123 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 TRAV7A0A075B6U4 112 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 IGKV2D-26A0A0A0MRZ7 120 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 CEBPZOSA8MTT3 80 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 IQCF6A8MYZ5 107 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 C16orf90A8MZG2 172 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
COPS3-216ENST00000579716 IGKV1D-33P01593 117 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms