RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZNF493Q6ZR52 646 aa9.75□□□□□ -0.85
SRSF1-202ENST00000578430 Q6ZWC4 215 aa9.75□□□□□ -0.85
SRSF1-202ENST00000578430 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
SRSF1-202ENST00000578430 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 H3BVH4 76 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
SRSF1-202ENST00000578430 HBBP68871 147 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 SPXQ9BT56 116 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
SRSF1-202ENST00000578430 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
SRSF1-202ENST00000578430 RAB5AP20339 215 aa9.73□□□□□ -0.85
SRSF1-202ENST00000578430 RRN3P1Q2M238 152 aa9.73□□□□□ -0.85
SRSF1-202ENST00000578430 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
SRSF1-202ENST00000578430 MRPL54Q6P161 138 aaKnown RBP9.73□□□□□ -0.85
SRSF1-202ENST00000578430 TMEM263Q8WUH6 116 aaKnown RBP9.73□□□□□ -0.85
SRSF1-202ENST00000578430 PTH2Q96A98 100 aa9.73□□□□□ -0.85
SRSF1-202ENST00000578430 SPINK4O60575 86 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 NXPH4O95158 308 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 MT-ND6P03923 174 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 HTN1P15515 57 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 ZFP82Q8N141 532 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 C16orf74Q96GX8 76 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 RCHY1Q96PM5 261 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 TP53TG1Q9Y2A0 90 aa9.72□□□□□ -0.85
SRSF1-202ENST00000578430 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.86
SRSF1-202ENST00000578430 NTF3P20783 257 aa9.71□□□□□ -0.86
SRSF1-202ENST00000578430 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.86
SRSF1-202ENST00000578430 OR10AG1Q8NH19 301 aa9.71□□□□□ -0.86
SRSF1-202ENST00000578430 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.86
SRSF1-202ENST00000578430 RNF183Q96D59 192 aa9.71□□□□□ -0.86
SRSF1-202ENST00000578430 HLA-DQA1P01909 254 aa9.7□□□□□ -0.86
SRSF1-202ENST00000578430 TRGC1P0CF51 173 aa9.7□□□□□ -0.86
SRSF1-202ENST00000578430 RPS10P46783 165 aaKnown RBP9.7□□□□□ -0.86
SRSF1-202ENST00000578430 TWIST1Q15672 202 aa9.7□□□□□ -0.86
SRSF1-202ENST00000578430 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
SRSF1-202ENST00000578430 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-202ENST00000578430 TIMM8BQ9Y5J9 83 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-202ENST00000578430 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 K7EIL1 84 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 M0R2P5 195 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 SPRY2O43597 315 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 AZU1P20160 251 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 CAMPP49913 170 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
SRSF1-202ENST00000578430 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 IL17DQ8TAD2 202 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
SRSF1-202ENST00000578430 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 M0R381 172 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 MIFP14174 115 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 RAB4BP61018 213 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 OR11H2Q8NH07 326 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 AP1S3Q96PC3 154 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 TMEM191AQ9H0A3 160 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 TRAPPC1Q9Y5R8 145 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 X6R8D5 127 aa9.68□□□□□ -0.86
SRSF1-202ENST00000578430 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 PRM2P04554 102 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 LGALS9BQ3B8N2 356 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 ZNF876PQ49A33 203 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
SRSF1-202ENST00000578430 SSTP61278 116 aa9.66□□□□□ -0.86
SRSF1-202ENST00000578430 RASL10AQ92737 203 aa9.66□□□□□ -0.86
SRSF1-202ENST00000578430 MRPL18Q9H0U6 180 aaKnown RBP9.66□□□□□ -0.86
SRSF1-202ENST00000578430 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
SRSF1-202ENST00000578430 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 A8MWV9 139 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 APCSP02743 223 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
SRSF1-202ENST00000578430 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 FRZBQ92765 325 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
SRSF1-202ENST00000578430 MUC4Q99102 2169 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 C1orf196B1AJZ1 125 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 TRGC2P03986 189 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 FABP9Q0Z7S8 132 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SRSF1-202ENST00000578430 LYRM9A8MSI8 78 aa9.63□□□□□ -0.87
SRSF1-202ENST00000578430 CIDEAO60543 219 aa9.63□□□□□ -0.87
SRSF1-202ENST00000578430 EVI2AP22794 236 aa9.63□□□□□ -0.87
SRSF1-202ENST00000578430 Q8NAQ8 132 aa9.63□□□□□ -0.87
SRSF1-202ENST00000578430 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
SRSF1-202ENST00000578430 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
SRSF1-202ENST00000578430 TRGV1A0A0A0MS02 117 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 RHODO00212 210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms