RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 NOTCH3Q9UM47 2321 aa13.57□□□□□ -0.24
PRKCA-203ENST00000578063 IGHV3-16A0A0C4DH30 117 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 CBY3A6NI87 242 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 SSTP61278 116 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 TRRAPQ9Y4A5 3859 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 LINC01587Q99440 93 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 MDFIQ99750 246 aa13.56□□□□□ -0.24
PRKCA-203ENST00000578063 ZMAT5Q9UDW3 170 aaKnown RBP13.56□□□□□ -0.24
PRKCA-203ENST00000578063 S100A6P06703 90 aa13.55□□□□□ -0.24
PRKCA-203ENST00000578063 C9orf85Q96MD7 179 aa13.55□□□□□ -0.24
PRKCA-203ENST00000578063 TMEM208Q9BTX3 173 aa13.55□□□□□ -0.24
PRKCA-203ENST00000578063 GIG44P09565 113 aaPredicted RBP13.54□□□□□ -0.24
PRKCA-203ENST00000578063 OXLD1Q5BKU9 147 aa13.54□□□□□ -0.24
PRKCA-203ENST00000578063 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
PRKCA-203ENST00000578063 NXPH4O95158 308 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 MSRB1Q9NZV6 116 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 GOLT1BQ9Y3E0 138 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 M0R381 172 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 EGFEM1PQ0D2K5 195 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 MDFICQ9P1T7 246 aa13.53□□□□□ -0.24
PRKCA-203ENST00000578063 LOC102724200A0A096LPH7 203 aaPredicted RBP13.52□□□□□ -0.25
PRKCA-203ENST00000578063 HTN1P15515 57 aa13.52□□□□□ -0.25
PRKCA-203ENST00000578063 KIAA1644Q3SXP7 199 aa13.52□□□□□ -0.25
PRKCA-203ENST00000578063 DMRTA1Q5VZB9 504 aa13.52□□□□□ -0.25
PRKCA-203ENST00000578063 FAM104BQ5XKR9 115 aa13.52□□□□□ -0.25
PRKCA-203ENST00000578063 CSTL1Q9H114 145 aa13.52□□□□□ -0.25
PRKCA-203ENST00000578063 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
PRKCA-203ENST00000578063 SYT8Q8NBV8 401 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 SRIP30626 198 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 NDUFA6P56556 154 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 CSNK1G2-AS1Q8NCQ2 148 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
PRKCA-203ENST00000578063 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 KIR2DL5BA0A0G2JN68 375 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 KIR2DL5BA0A0G2JPC4 375 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 KIR2DL5AQ8N109 375 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 ANK2Q01484 3957 aa13.49□□□□□ -0.25
PRKCA-203ENST00000578063 SPRY2O43597 315 aa13.48□□□□□ -0.25
PRKCA-203ENST00000578063 EVI2AP22794 236 aa13.48□□□□□ -0.25
PRKCA-203ENST00000578063 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
PRKCA-203ENST00000578063 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 APOC4P55056 127 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
PRKCA-203ENST00000578063 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 SNRPEP62304 92 aaKnown RBP13.47□□□□□ -0.25
PRKCA-203ENST00000578063 Q0VG73 95 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 OR10J3Q5JRS4 329 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 ZNF705AQ6ZN79 300 aaPredicted RBP13.47□□□□□ -0.25
PRKCA-203ENST00000578063 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
PRKCA-203ENST00000578063 RAB4AP20338 218 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 RIPPLY3P57055 190 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.25
PRKCA-203ENST00000578063 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
PRKCA-203ENST00000578063 PTH2Q96A98 100 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 RCHY1Q96PM5 261 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 SPXQ9BT56 116 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 DPH3P1Q9H4G8 78 aa13.46□□□□□ -0.25
PRKCA-203ENST00000578063 GSN-AS1Q9NRJ2 163 aa13.45□□□□□ -0.26
PRKCA-203ENST00000578063 U3KQK5 164 aa13.45□□□□□ -0.26
PRKCA-203ENST00000578063 M0R2P5 195 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 PPBPP02775 128 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 PRM2P04554 102 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 ZNF876PQ49A33 203 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 PIK3CD-AS1Q5SR53 167 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 ORMDL3Q8N138 153 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 RNASE8Q8TDE3 154 aaKnown RBP13.44□□□□□ -0.26
PRKCA-203ENST00000578063 PKD1L1Q8TDX9 2849 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 D6R8Y8 96 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 G3V4G9 280 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 SMIM17P0DL12 118 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 AZU1P20160 251 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 C14orf178Q8N769 122 aaPredicted RBP13.44□□□□□ -0.26
PRKCA-203ENST00000578063 C18orf32Q8TCD1 76 aa13.44□□□□□ -0.26
PRKCA-203ENST00000578063 CKS2P33552 79 aa13.43□□□□□ -0.26
PRKCA-203ENST00000578063 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
PRKCA-203ENST00000578063 IL17DQ8TAD2 202 aa13.43□□□□□ -0.26
PRKCA-203ENST00000578063 C16orf74Q96GX8 76 aa13.43□□□□□ -0.26
PRKCA-203ENST00000578063 UBE2CO00762 179 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 HOXA5P20719 270 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 RRN3P1Q2M238 152 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 MRAP2Q96G30 205 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 PRELID3AQ96N28 172 aa13.42□□□□□ -0.26
PRKCA-203ENST00000578063 MUC4Q99102 2169 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 CMYA5Q8N3K9 4069 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 A8MZ25 164 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 KIF25-AS1Q9Y6Z4 181 aa13.41□□□□□ -0.26
PRKCA-203ENST00000578063 POM121L12Q8N7R1 296 aa13.4□□□□□ -0.26
PRKCA-203ENST00000578063 A8MWV9 139 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 MGPP08493 103 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms