RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 CLLU1Q5K131 121 aa0.39□□□□□ -2.35
SNRPD1-202ENST00000577906 SNX29P2Q8IUI4 249 aa0.39□□□□□ -2.35
SNRPD1-202ENST00000577906 BDP1A6H8Y1 2624 aa0.38□□□□□ -2.35
SNRPD1-202ENST00000577906 RBP4P02753 201 aa0.38□□□□□ -2.35
SNRPD1-202ENST00000577906 ATP6V0E2Q8NHE4 81 aa0.38□□□□□ -2.35
SNRPD1-202ENST00000577906 LSM2Q9Y333 95 aaKnown RBP0.38□□□□□ -2.35
SNRPD1-202ENST00000577906 BLMP54132 1417 aaPredicted RBP0.38□□□□□ -2.35
SNRPD1-202ENST00000577906 HELZP42694 1942 aaKnown RBP0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 TRAV2A0A0B4J234 112 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 MPC1LP0DKB6 136 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 ATP11AUNQ6ZP68 121 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 DYNLRB2Q8TF09 96 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 VPS25Q9BRG1 176 aa0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 NOP16Q9Y3C1 178 aaKnown RBP0.37□□□□□ -2.35
SNRPD1-202ENST00000577906 ABCA4P78363 2273 aa0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 ATG2AQ2TAZ0 1938 aa0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 TEX49A0A1B0GTD5 131 aa0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 SLC25A6P12236 298 aa0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 ESPL1Q14674 2120 aa0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SNRPD1-202ENST00000577906 BCORL1Q5H9F3 1711 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 APOC1P02654 83 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 TMEM141Q96I45 108 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 TNCP24821 2201 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 KDM5CP41229 1560 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 ABCA1O95477 2261 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 UHRF1BP1LA0JNW5 1464 aa0.35□□□□□ -2.35
SNRPD1-202ENST00000577906 M0R2P5 195 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 ARPC5O15511 151 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 YPEL1O60688 119 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 PYYP10082 97 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 ELOF1P60002 83 aaKnown RBP0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 HIST1H1AQ02539 215 aaPredicted RBP0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 OR2T2Q6IF00 324 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 BATF3Q9NR55 127 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
SNRPD1-202ENST00000577906 DLEC1Q9Y238 1755 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 EMX2Q04743 252 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 IFI27L1Q96BM0 104 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 DSCR8Q96T75 97 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 COA4Q9NYJ1 87 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 BET1LQ9NYM9 111 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 RREB1Q92766 1687 aa0.33□□□□□ -2.36
SNRPD1-202ENST00000577906 SYNJ1O43426 1573 aa0.32□□□□□ -2.36
SNRPD1-202ENST00000577906 J3QLW9 94 aa0.32□□□□□ -2.36
SNRPD1-202ENST00000577906 CKS1BP61024 79 aa0.32□□□□□ -2.36
SNRPD1-202ENST00000577906 NCS1P62166 190 aa0.32□□□□□ -2.36
SNRPD1-202ENST00000577906 ARHGEF10O15013 1369 aa0.32□□□□□ -2.36
SNRPD1-202ENST00000577906 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 TRBV20-1A0A075B6N2 111 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 TRAV12-2A0A075B6T6 113 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 ZNF670-ZNF695F2Z2N8 137 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 IGLC6P0CF74 106 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 NDUFA11Q86Y39 141 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 MMGT1Q8N4V1 131 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 PPP1R1CQ8WVI7 109 aa0.31□□□□□ -2.36
SNRPD1-202ENST00000577906 CASZ1Q86V15 1759 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 FAM236AA0A1B0GUQ0 79 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 FAM236BA0A1B0GV22 79 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 TCRBV3S1A0A5B6 114 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 GSKIPQ9P0R6 139 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 ERG28Q9UKR5 140 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 JMJD1CQ15652 2540 aa0.3□□□□□ -2.36
SNRPD1-202ENST00000577906 PTPRMP28827 1452 aa0.29□□□□□ -2.36
SNRPD1-202ENST00000577906 ERCC6Q03468 1493 aa0.29□□□□□ -2.36
SNRPD1-202ENST00000577906 SMIM3Q9BZL3 60 aa0.29□□□□□ -2.36
SNRPD1-202ENST00000577906 RBBP6Q7Z6E9 1792 aaKnown RBP0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 LOC105371267A0A1B0GV96 52 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 CCDC179H3BU77 68 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 M0R129 80 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 LINC00694P0DN24 101 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 NPC2P61916 151 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 VMO1Q7Z5L0 202 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 PROK2Q9HC23 129 aa0.28□□□□□ -2.36
SNRPD1-202ENST00000577906 OVOS2A0A0J9YW53 1432 aa0.28□□□□□ -2.37
SNRPD1-202ENST00000577906 OVOS2Q6IE36 1432 aa0.28□□□□□ -2.37
SNRPD1-202ENST00000577906 A0A087WTM6 91 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 MCRIP1C9JLW8 97 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 TSPAN19P0C672 248 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 ALX1Q15699 326 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 LINC01545Q5VT33 79 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 CYP2G1PQ6ZSU1 146 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 SAR1AQ9NR31 198 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 TANC1Q9C0D5 1861 aa0.27□□□□□ -2.37
SNRPD1-202ENST00000577906 RBAKDNA6NC62 111 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 CCL3L1P16619 93 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 MIC13Q5XKP0 118 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 LZICQ8WZA0 190 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 NDUFA12Q9UI09 145 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 DISP2A7MBM2 1401 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 MED13LQ71F56 2210 aa0.26□□□□□ -2.37
SNRPD1-202ENST00000577906 SSPOA2VEC9 5147 aa0.25□□□□□ -2.37
SNRPD1-202ENST00000577906 CACNA1HO95180 2353 aa0.25□□□□□ -2.37
SNRPD1-202ENST00000577906 M0R2Z0 102 aa0.25□□□□□ -2.37
SNRPD1-202ENST00000577906 PITX3O75364 302 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms