RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 INSP01308 110 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 TYMSP04818 313 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 GIG44P09565 113 aaPredicted RBP7.33□□□□□ -1.24
CRLF3-202ENST00000577725 RAB5AP20339 215 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 PYGO2Q9BRQ0 406 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 NAT8BQ9UHF3 227 aa7.33□□□□□ -1.24
CRLF3-202ENST00000577725 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 IGHV3OR16-12A0A075B7B8 117 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 IGHV1OR15-1A0A075B7D0 117 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 ARMS2P0C7Q2 107 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 IGLC6P0CF74 106 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
CRLF3-202ENST00000577725 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
CRLF3-202ENST00000577725 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 BTF3L4Q96K17 158 aa7.32□□□□□ -1.24
CRLF3-202ENST00000577725 HTN1P15515 57 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 ASIPP42127 132 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 CAMPP49913 170 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 FAM159AQ6UWV7 190 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 LINC01587Q99440 93 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 GFRA4Q9GZZ7 299 aa7.31□□□□□ -1.24
CRLF3-202ENST00000577725 TRAV9-1A0A075B6T8 112 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 CBY3A6NI87 242 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 AMBPP02760 352 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 S100A4P26447 101 aaKnown RBP7.3□□□□□ -1.24
CRLF3-202ENST00000577725 CTRLP40313 264 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 RAB4BP61018 213 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 MDFICQ9P1T7 246 aa7.3□□□□□ -1.24
CRLF3-202ENST00000577725 MUC4Q99102 2169 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 IGHV3-16A0A0C4DH30 117 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 A0A1B0GUT8 65 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 A0A1B0GXF2 115 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 IGHV4-30-4P0DP06 118 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 RNASE3P12724 160 aaKnown RBP7.29□□□□□ -1.24
CRLF3-202ENST00000577725 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
CRLF3-202ENST00000577725 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
CRLF3-202ENST00000577725 RIGQ13278 110 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
CRLF3-202ENST00000577725 TMEM136Q6ZRR5 245 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 ZFP82Q8N141 532 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 TMEM208Q9BTX3 173 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
CRLF3-202ENST00000577725 MSRB1Q9NZV6 116 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
CRLF3-202ENST00000577725 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
CRLF3-202ENST00000577725 LOC102724200A0A096LPH7 203 aaPredicted RBP7.28□□□□□ -1.24
CRLF3-202ENST00000577725 SNURFLB1AK76 121 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 SNAI2O43623 268 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 TRGC2P03986 189 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 AZU1P20160 251 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 HBBP68871 147 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 TWIST1Q15672 202 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 BORCS7Q96B45 105 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 KCNS1Q96KK3 526 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 CSTL1Q9H114 145 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 GOLT1BQ9Y3E0 138 aa7.28□□□□□ -1.24
CRLF3-202ENST00000577725 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 M0R381 172 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 KIAA1644Q3SXP7 199 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 FRZBQ92765 325 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 C9orf85Q96MD7 179 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 MRPL18Q9H0U6 180 aaKnown RBP7.27□□□□□ -1.25
CRLF3-202ENST00000577725 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 GSN-AS1Q9NRJ2 163 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 TRAPPC1Q9Y5R8 145 aa7.27□□□□□ -1.25
CRLF3-202ENST00000577725 C1orf196B1AJZ1 125 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 OR5AL1P0C617 328 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 NTF3P20783 257 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 DNLZQ5SXM8 178 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 SPANXN1Q5VSR9 72 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 WDR73Q6P4I2 378 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 SBSPONQ8IVN8 264 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 CSNK1G2-AS1Q8NCQ2 148 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 C20orf144Q9BQM9 153 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 SCRT2Q9NQ03 307 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 PHLDA3Q9Y5J5 127 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
CRLF3-202ENST00000577725 F2Z2F3 143 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 PHOX2AO14813 284 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 MED14OSP0DP75 135 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 CACNG7P62955 275 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 ZNF415Q09FC8 603 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 SLAQ13239 276 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 DEFB135Q30KP9 77 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 TMEM256Q8N2U0 113 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 C11orf72Q8NBR9 251 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 LINC00467Q9BRT7 94 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
CRLF3-202ENST00000577725 GNB1LQ9BYB4 327 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms