RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PCBD1P61457 104 aa-0.51□□□□□ -2.49
CDC27-216ENST00000574304 TNS1Q9HBL0 1735 aaKnown RBP-0.51□□□□□ -2.49
CDC27-216ENST00000574304 HYDINQ4G0P3 5121 aa-0.51□□□□□ -2.49
CDC27-216ENST00000574304 LRP5O75197 1615 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 FAT1Q14517 4588 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 HIVEP1P15822 2718 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 APOC1P02654 83 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 KRTAP19-7Q3SYF9 63 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 THEM6Q8WUY1 208 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 BET1LQ9NYM9 111 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 APC2O95996 2303 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 EPPK1P58107 5090 aaKnown RBP-0.52□□□□□ -2.49
CDC27-216ENST00000574304 HELZP42694 1942 aaKnown RBP-0.52□□□□□ -2.49
CDC27-216ENST00000574304 TENM2Q9NT68 2774 aa-0.52□□□□□ -2.49
CDC27-216ENST00000574304 TEX49A0A1B0GTD5 131 aa-0.53□□□□□ -2.49
CDC27-216ENST00000574304 E7EQ34 232 aa-0.53□□□□□ -2.49
CDC27-216ENST00000574304 FAM107AO95990 144 aa-0.53□□□□□ -2.49
CDC27-216ENST00000574304 RPL7P18124 248 aaKnown RBP-0.53□□□□□ -2.49
CDC27-216ENST00000574304 POLR2HP52434 150 aaKnown RBP-0.53□□□□□ -2.49
CDC27-216ENST00000574304 ELOF1P60002 83 aaKnown RBP-0.53□□□□□ -2.49
CDC27-216ENST00000574304 OR4S1Q8NGB4 309 aa-0.53□□□□□ -2.49
CDC27-216ENST00000574304 A2MP01023 1474 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 RYR2Q92736 4967 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 KIDINS220Q9ULH0 1771 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 KMT2AQ03164 3969 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 ZNF670-ZNF695F2Z2N8 137 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 IFNA21P01568 189 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 SLC25A5P05141 298 aaKnown RBP-0.54□□□□□ -2.5
CDC27-216ENST00000574304 NMBP08949 121 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 RPL22P35268 128 aaKnown RBP-0.54□□□□□ -2.5
CDC27-216ENST00000574304 MT4P47944 62 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 GNG10P50151 68 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 EMX2Q04743 252 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 NAT14Q8WUY8 206 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 PPP1R1CQ8WVI7 109 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 BPESC1Q9GZL8 116 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 PCBD2Q9H0N5 130 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 SETD2Q9BYW2 2564 aaPredicted RBP-0.54□□□□□ -2.5
CDC27-216ENST00000574304 DCHS2Q6V1P9 2916 aa-0.54□□□□□ -2.5
CDC27-216ENST00000574304 PTPN13Q12923 2485 aa-0.55□□□□□ -2.5
CDC27-216ENST00000574304 HECTD4Q9Y4D8 3996 aa-0.55□□□□□ -2.5
CDC27-216ENST00000574304 TRAV12-2A0A075B6T6 113 aa-0.55□□□□□ -2.5
CDC27-216ENST00000574304 UQCRQO14949 82 aa-0.55□□□□□ -2.5
CDC27-216ENST00000574304 OR2H2O95918 312 aa-0.55□□□□□ -2.5
CDC27-216ENST00000574304 CFDP00746 253 aaPredicted RBP-0.55□□□□□ -2.5
CDC27-216ENST00000574304 CREBBPQ92793 2442 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 LPAP08519 4548 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 E5RI56 91 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 ATPIF1Q9UII2 106 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 PTPRGP23470 1445 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 PDZD2O15018 2839 aa-0.56□□□□□ -2.5
CDC27-216ENST00000574304 SONP18583 2426 aaKnown RBP-0.57□□□□□ -2.5
CDC27-216ENST00000574304 GVQW2A0A096LPI5 108 aaPredicted RBP-0.57□□□□□ -2.5
CDC27-216ENST00000574304 PNMA8CA0A1B0GUJ8 204 aa-0.57□□□□□ -2.5
CDC27-216ENST00000574304 TCRAP04437 139 aa-0.57□□□□□ -2.5
CDC27-216ENST00000574304 ROCK1Q13464 1354 aa-0.57□□□□□ -2.5
CDC27-216ENST00000574304 CDK13Q14004 1512 aaKnown RBP-0.58□□□□□ -2.5
CDC27-216ENST00000574304 DOCK11Q5JSL3 2073 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 NF1P21359 2839 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 VIRMAQ69YN4 1812 aaKnown RBP-0.58□□□□□ -2.5
CDC27-216ENST00000574304 CXorf51AA0A1B0GTR3 108 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 PPP1R2P3Q6NXS1 205 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 SLC25A26Q70HW3 274 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 STARD9Q9P2P6 4700 aa-0.58□□□□□ -2.5
CDC27-216ENST00000574304 COL6A3P12111 3177 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 MAP1BP46821 2468 aaKnown RBP-0.59□□□□□ -2.5
CDC27-216ENST00000574304 TCRBV3S1A0A5B6 114 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 AKR1D1P51857 326 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 PSPHP78330 225 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 SMIM11BQ8TCY0 68 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 CCDC115Q96NT0 180 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 METTL1Q9UBP6 276 aaKnown RBP-0.59□□□□□ -2.5
CDC27-216ENST00000574304 NDUFAF1Q9Y375 327 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 ABCA13Q86UQ4 5058 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 CSMD3Q7Z407 3707 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 STAB2Q8WWQ8 2551 aa-0.59□□□□□ -2.5
CDC27-216ENST00000574304 SETXQ7Z333 2677 aaKnown RBP-0.6□□□□□ -2.5
CDC27-216ENST00000574304 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.6□□□□□ -2.5
CDC27-216ENST00000574304 PGRMC1O00264 195 aaKnown RBP-0.6□□□□□ -2.51
CDC27-216ENST00000574304 HIST1H1BP16401 226 aaKnown RBP-0.6□□□□□ -2.51
CDC27-216ENST00000574304 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.6□□□□□ -2.51
CDC27-216ENST00000574304 OR9Q1Q8NGQ5 310 aa-0.6□□□□□ -2.51
CDC27-216ENST00000574304 PPDPFLQ8WWR9 84 aa-0.6□□□□□ -2.51
CDC27-216ENST00000574304 VPS25Q9BRG1 176 aa-0.6□□□□□ -2.51
CDC27-216ENST00000574304 PKD1L1Q8TDX9 2849 aa-0.6□□□□□ -2.51
CDC27-216ENST00000574304 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.61□□□□□ -2.51
CDC27-216ENST00000574304 AKAP6Q13023 2319 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 MYCBP2O75592 4640 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 RBAKDNA6NC62 111 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 SPRR2DP22532 72 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 PLGLB1Q02325 96 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 HSD17B12Q53GQ0 312 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 TMEM35BQ8NCS4 154 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 LRP1BQ9NZR2 4599 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 PTPRQQ9UMZ3 2332 aa-0.61□□□□□ -2.51
CDC27-216ENST00000574304 ACANP16112 2415 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 ZNF292O60281 2723 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 WDR97A6NE52 1622 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 APODP05090 189 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 COX4I1P13073 169 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms