RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TPPP3Q9BW30 176 aa8.65□□□□□ -1.02
CDRT1-206ENST00000571263 H3BVH4 76 aa8.64□□□□□ -1.03
CDRT1-206ENST00000571263 K7EIL1 84 aa8.64□□□□□ -1.03
CDRT1-206ENST00000571263 SCO1O75880 301 aa8.64□□□□□ -1.03
CDRT1-206ENST00000571263 RNASE3P12724 160 aaKnown RBP8.64□□□□□ -1.03
CDRT1-206ENST00000571263 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
CDRT1-206ENST00000571263 YPEL4Q96NS1 127 aa8.64□□□□□ -1.03
CDRT1-206ENST00000571263 COLCA2A8K830 154 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 M0R2P5 195 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 MT-ND6P03923 174 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 NTF3P20783 257 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 HBBP68871 147 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 DAZ2Q13117 558 aaKnown RBP8.63□□□□□ -1.03
CDRT1-206ENST00000571263 TWIST1Q15672 202 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
CDRT1-206ENST00000571263 GNB1LQ9BYB4 327 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
CDRT1-206ENST00000571263 TGIF2-C20orf24A0A0A6YYL0 155 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 CIDEAO60543 219 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 SPATA25Q9BR10 227 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 OVOL2Q9BRP0 275 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 GSN-AS1Q9NRJ2 163 aa8.62□□□□□ -1.03
CDRT1-206ENST00000571263 TIMM8BQ9Y5J9 83 aaPredicted RBP8.62□□□□□ -1.03
CDRT1-206ENST00000571263 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 SPINK4O60575 86 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 NXPH4O95158 308 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 AZU1P20160 251 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 RAB5AP20339 215 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 MRPL54Q6P161 138 aaKnown RBP8.61□□□□□ -1.03
CDRT1-206ENST00000571263 GATD1Q8NB37 220 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 RASL10AQ92737 203 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 FRZBQ92765 325 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 X6R8D5 127 aa8.61□□□□□ -1.03
CDRT1-206ENST00000571263 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 A8MWV9 139 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 M0R381 172 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 CAMPP49913 170 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 OR10AG1Q8NH19 301 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 MRAPQ8TCY5 172 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 TMEM191AQ9H0A3 160 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
CDRT1-206ENST00000571263 LYRM9A8MSI8 78 aa8.59□□□□□ -1.03
CDRT1-206ENST00000571263 RAB4BP61018 213 aa8.59□□□□□ -1.03
CDRT1-206ENST00000571263 VWFP04275 2813 aa8.59□□□□□ -1.03
CDRT1-206ENST00000571263 PRB2P02812 416 aaPredicted RBP8.58□□□□□ -1.04
CDRT1-206ENST00000571263 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
CDRT1-206ENST00000571263 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
CDRT1-206ENST00000571263 SBSPONQ8IVN8 264 aa8.58□□□□□ -1.04
CDRT1-206ENST00000571263 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
CDRT1-206ENST00000571263 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
CDRT1-206ENST00000571263 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
CDRT1-206ENST00000571263 PLAC8L1A1L4L8 177 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 RHODO00212 210 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 NHLRC4P0CG21 123 aaPredicted RBP8.57□□□□□ -1.04
CDRT1-206ENST00000571263 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 C18orf15Q96N68 181 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 B9D2Q9BPU9 175 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 NOP10Q9NPE3 64 aaKnown RBP8.57□□□□□ -1.04
CDRT1-206ENST00000571263 TRRAPQ9Y4A5 3859 aa8.57□□□□□ -1.04
CDRT1-206ENST00000571263 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 APCSP02743 223 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 PPBPP02775 128 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 PRM2P04554 102 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 SSTP61278 116 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 Q8NAQ8 132 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
CDRT1-206ENST00000571263 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 ANK2Q01484 3957 aa8.56□□□□□ -1.04
CDRT1-206ENST00000571263 RS1O15537 224 aa8.55□□□□□ -1.04
CDRT1-206ENST00000571263 PPP1R17O96001 155 aa8.55□□□□□ -1.04
CDRT1-206ENST00000571263 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
CDRT1-206ENST00000571263 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
CDRT1-206ENST00000571263 MRPL18Q9H0U6 180 aaKnown RBP8.55□□□□□ -1.04
CDRT1-206ENST00000571263 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 TRAV4A0A0B4J268 109 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 EVI2AP22794 236 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 EMP1P54849 157 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
CDRT1-206ENST00000571263 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
CDRT1-206ENST00000571263 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
CDRT1-206ENST00000571263 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
CDRT1-206ENST00000571263 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms