RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TMEM78	Q5T7P6	136 aa		9.24	□□□□□ -0.93
SPG7-222	ENST00000569820	SVEP1	Q4LDE5	3571 aa		9.24	□□□□□ -0.93
SPG7-222	ENST00000569820		H3BRN7	92 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	TEN1	Q86WV5	123 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	TMEM158	Q8WZ71	300 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	DNAJC30	Q96LL9	226 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	TRBV20-1	A0A075B6N2	111 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	DLX4	Q92988	240 aa	Predicted RBP	9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	CARD19	Q96LW7	228 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	AAMDC	Q9H7C9	122 aa		9.23	□□□□□ -0.93
SPG7-222	ENST00000569820	SMIM9	A6NGZ8	99 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	NPFF	O15130	113 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	TNFRSF6B	O95407	300 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	EGR2	P11161	476 aa	Predicted RBP	9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	COX6B1	P14854	86 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	NDP	Q00604	133 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	MEIG1	Q5JSS6	88 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	FAM159A	Q6UWV7	190 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	RNF185	Q96GF1	192 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	MRPL35	Q9NZE8	188 aa	Known RBP	9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	NCBP2L	A6PVI3	153 aa	Known RBP	9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	IGKV1-17	P01599	117 aa		9.22	□□□□□ -0.93
SPG7-222	ENST00000569820	CSMD2	Q7Z408	3487 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	TRBV7-3	A0A075B6L6	115 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820		I3L2K1	104 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	SNCG	O76070	127 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	GAS8-AS1	O95177	125 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	ASIP	P42127	132 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	KIR2DL4	Q99706	377 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	MSRB1	Q9NZV6	116 aa		9.21	□□□□□ -0.93
SPG7-222	ENST00000569820	IGLC6	P0CF74	106 aa		9.21	□□□□□ -0.94
SPG7-222	ENST00000569820	MDFIC	Q9P1T7	246 aa		9.21	□□□□□ -0.94
SPG7-222	ENST00000569820	CSMD1	Q96PZ7	3565 aa		9.21	□□□□□ -0.94
SPG7-222	ENST00000569820	ANKRD17	O75179	2603 aa	Known RBP	9.21	□□□□□ -0.94
SPG7-222	ENST00000569820	MRPS12	O15235	138 aa	Known RBP	9.2	□□□□□ -0.94
SPG7-222	ENST00000569820		Q8N9W7	124 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.2	□□□□□ -0.94
SPG7-222	ENST00000569820		K7EIM0	57 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	IGKV2D-40	P01614	121 aa	Predicted RBP	9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	IL4	P05112	153 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	PDE6H	Q13956	83 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	MORN3	Q6PF18	240 aa	Predicted RBP	9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	COX8C	Q7Z4L0	72 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	MYOZ3	Q8TDC0	251 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	RNF125	Q96EQ8	232 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	PRR25	Q96S07	402 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	CENPE	Q02224	2701 aa		9.2	□□□□□ -0.94
SPG7-222	ENST00000569820	HOXA3	O43365	443 aa	Predicted RBP	9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	PLN	P26678	52 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820		Q8N8P6	123 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	KMT2B	Q9UMN6	2715 aa	Predicted RBP	9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	CELSR1	Q9NYQ6	3014 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	MAP1A	P78559	2803 aa	Predicted RBP	9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	IGHV3OR16-10	A0A075B7F0	116 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	IGHV7-81	A0A0B4J1V7	117 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	IGHV1-69D	A0A0B4J2H0	117 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	LINC01619	G3V211	115 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	IGHV1-69	P01742	117 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	MSMB	P08118	114 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	DSCR9	P59020	149 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	ZNF491	Q8N8L2	437 aa		9.19	□□□□□ -0.94
SPG7-222	ENST00000569820	TGFA	P01135	160 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	GATA1	P15976	413 aa	Predicted RBP	9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	ZNF80	P51504	273 aa	Predicted RBP	9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	OR10J6P	Q8NGY7	276 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820		Q8TAT8	98 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	RASL10A	Q92737	203 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	FANCD2OS	Q96PS1	177 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	CNFN	Q9BYD5	112 aa		9.18	□□□□□ -0.94
SPG7-222	ENST00000569820	IGLV11-55	A0A075B6I3	123 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	MYMX	A0A1B0GTQ4	84 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	ORM1	P02763	201 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	BRD3OS	Q6XYD6	125 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	SBSPON	Q8IVN8	264 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	USP9Y	O00507	2555 aa	Predicted RBP	9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	CHD6	Q8TD26	2715 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	POLQ	O75417	2590 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820		A0A096LNT2	108 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	IGHV4-38-2	P0DP08	117 aa		9.17	□□□□□ -0.94
SPG7-222	ENST00000569820	IGLV2-18	A0A075B6J9	118 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	TRAV4	A0A0B4J268	109 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	SLC25A16	P16260	332 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	PSMB2	P49721	201 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	LAGE3	Q14657	143 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	9.16	□□□□□ -0.94	3e-10	■■■□□ 18
SPG7-222	ENST00000569820	TENM4	Q6N022	2769 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	LOC107984156	A0A0G2JMH3	177 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	KRTAP10-9	P60411	292 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	LYRM7	Q5U5X0	104 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820	ARL17A	Q8IVW1	177 aa		9.16	□□□□□ -0.94
SPG7-222	ENST00000569820		B4DSR2	109 aa		9.15	□□□□□ -0.94
SPG7-222	ENST00000569820	SRSF2	Q01130	221 aa	Known RBP	9.15	□□□□□ -0.94
SPG7-222	ENST00000569820	ZNF575	Q86XF7	245 aa		9.15	□□□□□ -0.94
SPG7-222	ENST00000569820	LRRC75A-AS1	Q8N1F1	130 aa		9.15	□□□□□ -0.94
SPG7-222	ENST00000569820	PTPN13	Q12923	2485 aa		9.15	□□□□□ -0.94
SPG7-222	ENST00000569820	LINC01549	A6NIU2	74 aa		9.15	□□□□□ -0.95
SPG7-222	ENST00000569820		A8MWV9	139 aa		9.15	□□□□□ -0.95
SPG7-222	ENST00000569820	LINC01587	Q99440	93 aa		9.15	□□□□□ -0.95
SPG7-222	ENST00000569820		S4R3C0	116 aa		9.15	□□□□□ -0.95
SPG7-222	ENST00000569820		F8VRH5	84 aa		9.14	□□□□□ -0.95

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