RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
SPG7-222ENST00000569820 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
SPG7-222ENST00000569820 H3BRN7 92 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 TMEM158Q8WZ71 300 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 DNAJC30Q96LL9 226 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 DLX4Q92988 240 aaPredicted RBP9.23□□□□□ -0.93
SPG7-222ENST00000569820 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
SPG7-222ENST00000569820 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 NPFFO15130 113 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 EGR2P11161 476 aaPredicted RBP9.22□□□□□ -0.93
SPG7-222ENST00000569820 COX6B1P14854 86 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 NDPQ00604 133 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 MRPL35Q9NZE8 188 aaKnown RBP9.22□□□□□ -0.93
SPG7-222ENST00000569820 NCBP2LA6PVI3 153 aaKnown RBP9.22□□□□□ -0.93
SPG7-222ENST00000569820 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
SPG7-222ENST00000569820 CSMD2Q7Z408 3487 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 I3L2K1 104 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 SNCGO76070 127 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 GAS8-AS1O95177 125 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 ASIPP42127 132 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 KIR2DL4Q99706 377 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.93
SPG7-222ENST00000569820 IGLC6P0CF74 106 aa9.21□□□□□ -0.94
SPG7-222ENST00000569820 MDFICQ9P1T7 246 aa9.21□□□□□ -0.94
SPG7-222ENST00000569820 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
SPG7-222ENST00000569820 ANKRD17O75179 2603 aaKnown RBP9.21□□□□□ -0.94
SPG7-222ENST00000569820 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
SPG7-222ENST00000569820 Q8N9W7 124 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 IGKV2-40A0A087WW87 121 aaPredicted RBP9.2□□□□□ -0.94
SPG7-222ENST00000569820 K7EIM0 57 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 IGKV2D-40P01614 121 aaPredicted RBP9.2□□□□□ -0.94
SPG7-222ENST00000569820 IL4P05112 153 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 PDE6HQ13956 83 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
SPG7-222ENST00000569820 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 MYOZ3Q8TDC0 251 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 RNF125Q96EQ8 232 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 PRR25Q96S07 402 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 CENPEQ02224 2701 aa9.2□□□□□ -0.94
SPG7-222ENST00000569820 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
SPG7-222ENST00000569820 PLNP26678 52 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 Q8N8P6 123 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 KMT2BQ9UMN6 2715 aaPredicted RBP9.19□□□□□ -0.94
SPG7-222ENST00000569820 CELSR1Q9NYQ6 3014 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 MAP1AP78559 2803 aaPredicted RBP9.19□□□□□ -0.94
SPG7-222ENST00000569820 IGHV3OR16-10A0A075B7F0 116 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 IGHV7-81A0A0B4J1V7 117 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 LINC01619G3V211 115 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 MSMBP08118 114 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 DSCR9P59020 149 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 ZNF491Q8N8L2 437 aa9.19□□□□□ -0.94
SPG7-222ENST00000569820 TGFAP01135 160 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 GATA1P15976 413 aaPredicted RBP9.18□□□□□ -0.94
SPG7-222ENST00000569820 ZNF80P51504 273 aaPredicted RBP9.18□□□□□ -0.94
SPG7-222ENST00000569820 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 Q8TAT8 98 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 RASL10AQ92737 203 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 CNFNQ9BYD5 112 aa9.18□□□□□ -0.94
SPG7-222ENST00000569820 IGLV11-55A0A075B6I3 123 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 ORM1P02763 201 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 SBSPONQ8IVN8 264 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 USP9YO00507 2555 aaPredicted RBP9.17□□□□□ -0.94
SPG7-222ENST00000569820 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 POLQO75417 2590 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 A0A096LNT2 108 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 IGHV4-38-2P0DP08 117 aa9.17□□□□□ -0.94
SPG7-222ENST00000569820 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 TRAV4A0A0B4J268 109 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 SLC25A16P16260 332 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 PSMB2P49721 201 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 LAGE3Q14657 143 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.16□□□□□ -0.943e-10■■■□□ 18
SPG7-222ENST00000569820 TENM4Q6N022 2769 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 KRTAP10-9P60411 292 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 LYRM7Q5U5X0 104 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
SPG7-222ENST00000569820 B4DSR2 109 aa9.15□□□□□ -0.94
SPG7-222ENST00000569820 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
SPG7-222ENST00000569820 ZNF575Q86XF7 245 aa9.15□□□□□ -0.94
SPG7-222ENST00000569820 LRRC75A-AS1Q8N1F1 130 aa9.15□□□□□ -0.94
SPG7-222ENST00000569820 PTPN13Q12923 2485 aa9.15□□□□□ -0.94
SPG7-222ENST00000569820 LINC01549A6NIU2 74 aa9.15□□□□□ -0.95
SPG7-222ENST00000569820 A8MWV9 139 aa9.15□□□□□ -0.95
SPG7-222ENST00000569820 LINC01587Q99440 93 aa9.15□□□□□ -0.95
SPG7-222ENST00000569820 S4R3C0 116 aa9.15□□□□□ -0.95
SPG7-222ENST00000569820 F8VRH5 84 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms