RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PRNTQ86SH4 94 aa18.59■□□□□ 0.57
UBFD1-206ENST00000566669 ATP6V0E2Q8NHE4 81 aa18.59■□□□□ 0.57
UBFD1-206ENST00000566669 TMEM70Q9BUB7 260 aa18.59■□□□□ 0.57
UBFD1-206ENST00000566669 C11orf21Q9P2W6 132 aa18.59■□□□□ 0.57
UBFD1-206ENST00000566669 IGLV5-52A0A0A0MRZ9 124 aa18.58■□□□□ 0.56
UBFD1-206ENST00000566669 A8MWV9 139 aa18.58■□□□□ 0.56
UBFD1-206ENST00000566669 GGTLC3B5MD39 225 aa18.58■□□□□ 0.56
UBFD1-206ENST00000566669 PTTG1O95997 202 aa18.58■□□□□ 0.56
UBFD1-206ENST00000566669 INAFM2P0DMQ5 153 aa18.58■□□□□ 0.56
UBFD1-206ENST00000566669 FUSP35637 526 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBFD1-206ENST00000566669 INO80EQ8NBZ0 244 aaPredicted RBP18.58■□□□□ 0.56
UBFD1-206ENST00000566669 NKX6-2Q9C056 277 aaPredicted RBP18.58■□□□□ 0.56
UBFD1-206ENST00000566669 Q5VSD8 79 aa18.57■□□□□ 0.56
UBFD1-206ENST00000566669 TM2D2Q9BX73 214 aa18.57■□□□□ 0.56
UBFD1-206ENST00000566669 BATF3Q9NR55 127 aa18.57■□□□□ 0.56
UBFD1-206ENST00000566669 BORCS7-ASMTA0A0B4J1R7 106 aa18.56■□□□□ 0.56
UBFD1-206ENST00000566669 LRCOL1A6NCL2 159 aa18.56■□□□□ 0.56
UBFD1-206ENST00000566669 RNASE3P12724 160 aaKnown RBP18.56■□□□□ 0.56
UBFD1-206ENST00000566669 S100A4P26447 101 aaKnown RBP18.56■□□□□ 0.56
UBFD1-206ENST00000566669 DPPA3Q6W0C5 159 aa18.56■□□□□ 0.56
UBFD1-206ENST00000566669 PGPEP1LA6NFU8 196 aa18.55■□□□□ 0.56
UBFD1-206ENST00000566669 FABP5P3A8MUU1 101 aa18.54■□□□□ 0.56
UBFD1-206ENST00000566669 IGHV3-73A0A0B4J1V6 119 aa18.53■□□□□ 0.56
UBFD1-206ENST00000566669 FAM229AH3BQW9 127 aa18.53■□□□□ 0.56
UBFD1-206ENST00000566669 GIPP09681 153 aaPredicted RBP18.53■□□□□ 0.56
UBFD1-206ENST00000566669 TOR2AQ5JU69 321 aa18.53■□□□□ 0.56
UBFD1-206ENST00000566669 Q8N814 137 aa18.53■□□□□ 0.56
UBFD1-206ENST00000566669 A0A087WWC5 75 aa18.52■□□□□ 0.56
UBFD1-206ENST00000566669 ASIPP42127 132 aa18.52■□□□□ 0.56
UBFD1-206ENST00000566669 FGF8P55075 233 aaPredicted RBP18.52■□□□□ 0.56
UBFD1-206ENST00000566669 HIST1H2BAQ96A08 127 aa18.52■□□□□ 0.56
UBFD1-206ENST00000566669 CTXND1A0A1B0GTU2 59 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 IFNA7P01567 189 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 C1QBP02746 253 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 PARLQ9H300 379 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 Q9HAA7 133 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 IL36BQ9NZH7 164 aa18.51■□□□□ 0.55
UBFD1-206ENST00000566669 DMBT1Q9UGM3 2413 aaPredicted RBP18.51■□□□□ 0.55
UBFD1-206ENST00000566669 TRAV8-3A0A0A6YYJ7 113 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 IGHV3-30P01768 117 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 IGHV3-33P01772 117 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 IGHV3-30-3P0DP02 117 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 IGHV3-30-5P0DP03 117 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 ARL2-SNX15V9GYD0 113 aa18.5■□□□□ 0.55
UBFD1-206ENST00000566669 RHODO00212 210 aa18.49■□□□□ 0.55
UBFD1-206ENST00000566669 LGALSLQ3ZCW2 172 aaPredicted RBP18.49■□□□□ 0.55
UBFD1-206ENST00000566669 SYT8Q8NBV8 401 aa18.49■□□□□ 0.55
UBFD1-206ENST00000566669 COX11Q9Y6N1 276 aa18.49■□□□□ 0.55
UBFD1-206ENST00000566669 IGKV3D-20A0A0C4DH25 116 aa18.48■□□□□ 0.55
UBFD1-206ENST00000566669 SEC11BP0C7V7 166 aa18.48■□□□□ 0.55
UBFD1-206ENST00000566669 ZFP30Q9Y2G7 519 aa18.48■□□□□ 0.55
UBFD1-206ENST00000566669 PEX7O00628 323 aa18.47■□□□□ 0.55
UBFD1-206ENST00000566669 DNLZQ5SXM8 178 aa18.47■□□□□ 0.55
UBFD1-206ENST00000566669 TCEAL7Q9BRU2 100 aa18.47■□□□□ 0.55
UBFD1-206ENST00000566669 LINC00694P0DN24 101 aa18.46■□□□□ 0.55
UBFD1-206ENST00000566669 RPL7L1Q6DKI1 246 aaKnown RBP18.46■□□□□ 0.55
UBFD1-206ENST00000566669 COX8CQ7Z4L0 72 aa18.46■□□□□ 0.55
UBFD1-206ENST00000566669 B4DEV8 164 aa18.45■□□□□ 0.54
UBFD1-206ENST00000566669 AKR1C8PQ5T2L2 129 aa18.45■□□□□ 0.54
UBFD1-206ENST00000566669 Q86TA4 180 aa18.45■□□□□ 0.54
UBFD1-206ENST00000566669 LINC00479Q96M42 142 aa18.45■□□□□ 0.54
UBFD1-206ENST00000566669 SRRM2Q9UQ35 2752 aaKnown RBP18.44■□□□□ 0.54
UBFD1-206ENST00000566669 TRAV34A0A0B4J273 112 aa18.44■□□□□ 0.54
UBFD1-206ENST00000566669 FXYD6-FXYD2A0A087WZ82 144 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 RNF222A6NCQ9 220 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 GAGE12JA6NER3 117 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 GAGE1Q13065 139 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 GAGE4Q13068 117 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 GAGE5Q13069 117 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 GAGE13Q4V321 117 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 FMC1Q96HJ9 113 aa18.43■□□□□ 0.54
UBFD1-206ENST00000566669 FAM74A7A6NL05 159 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 ZNF726P1Q15940 193 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 Q5BKY6 102 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 UFSP1Q6NVU6 142 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 Q6ZSN1 163 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 OR11H4Q8NGC9 324 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 RMI2Q96E14 147 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 URGCP-MRPS24S4R325 110 aa18.42■□□□□ 0.54
UBFD1-206ENST00000566669 SMR3BP02814 79 aaPredicted RBP18.41■□□□□ 0.54
UBFD1-206ENST00000566669 UBE2G2P60604 165 aa18.41■□□□□ 0.54
UBFD1-206ENST00000566669 FAM162BQ5T6X4 162 aa18.41■□□□□ 0.54
UBFD1-206ENST00000566669 KRBOX1C9JBD0 128 aa18.4■□□□□ 0.54
UBFD1-206ENST00000566669 UBE2G1P62253 170 aa18.4■□□□□ 0.54
UBFD1-206ENST00000566669 OR2T35Q8NGX2 323 aa18.4■□□□□ 0.54
UBFD1-206ENST00000566669 FAT1Q14517 4588 aa18.39■□□□□ 0.54
UBFD1-206ENST00000566669 H3BVH4 76 aa18.39■□□□□ 0.53
UBFD1-206ENST00000566669 FHITP49789 147 aa18.39■□□□□ 0.53
UBFD1-206ENST00000566669 STOML3Q8TAV4 291 aa18.39■□□□□ 0.53
UBFD1-206ENST00000566669 PHLDA3Q9Y5J5 127 aa18.39■□□□□ 0.53
UBFD1-206ENST00000566669 TRBV6-1A0A0K0K1D8 114 aa18.38■□□□□ 0.53
UBFD1-206ENST00000566669 ARMS2P0C7Q2 107 aa18.38■□□□□ 0.53
UBFD1-206ENST00000566669 DMRTA1Q5VZB9 504 aa18.38■□□□□ 0.53
UBFD1-206ENST00000566669 CHCHD7Q9BUK0 85 aa18.38■□□□□ 0.53
UBFD1-206ENST00000566669 HERC1Q15751 4861 aa18.38■□□□□ 0.53
UBFD1-206ENST00000566669 ZC2HC1AQ96GY0 325 aa18.37■□□□□ 0.53
UBFD1-206ENST00000566669 TRBV10-1A0A0K0K1A3 114 aa18.36■□□□□ 0.53
UBFD1-206ENST00000566669 MAP1LC3B2A6NCE7 125 aa18.36■□□□□ 0.53
UBFD1-206ENST00000566669 TPT1P13693 172 aaKnown RBP18.36■□□□□ 0.53
UBFD1-206ENST00000566669 ELOBQ15370 118 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms