RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ATP5J2P56134 94 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 FBN2P35556 2912 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 RNF223E7ERA6 249 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 ASIPP42127 132 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 APCP25054 2843 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 BAHCC1Q9P281 2608 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 A0A087WX48 190 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 A0A0G2JLM5 398 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 TTTY13Q9BZ97 58 aa11.49□□□□□ -0.57
HERC2-207ENST00000564734 MRPL35Q9NZE8 188 aaKnown RBP11.49□□□□□ -0.57
HERC2-207ENST00000564734 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
HERC2-207ENST00000564734 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
HERC2-207ENST00000564734 UFSP1Q6NVU6 142 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 GTSCR1Q86UQ5 136 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 DPH3P1Q9H4G8 78 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 M0R381 172 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 KRTAP10-9P60411 292 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 POM121L12Q8N7R1 296 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
HERC2-207ENST00000564734 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
HERC2-207ENST00000564734 GNRH2O43555 120 aa11.47□□□□□ -0.57
HERC2-207ENST00000564734 K7EMT4 169 aa11.47□□□□□ -0.57
HERC2-207ENST00000564734 EDN2P20800 178 aa11.47□□□□□ -0.57
HERC2-207ENST00000564734 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
HERC2-207ENST00000564734 NBPF19A0A087WUL8 3843 aa11.46□□□□□ -0.57
HERC2-207ENST00000564734 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
HERC2-207ENST00000564734 TMEM160Q9NX00 188 aa11.46□□□□□ -0.57
HERC2-207ENST00000564734 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
HERC2-207ENST00000564734 NXPH4O95158 308 aa11.46□□□□□ -0.57
HERC2-207ENST00000564734 S100A4P26447 101 aaKnown RBP11.46□□□□□ -0.57
HERC2-207ENST00000564734 C14orf178Q8N769 122 aaPredicted RBP11.46□□□□□ -0.57
HERC2-207ENST00000564734 TOMM6Q96B49 74 aa11.46□□□□□ -0.57
HERC2-207ENST00000564734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.581e-6■■■□□ 17.7
HERC2-207ENST00000564734 ACANP16112 2415 aa11.46□□□□□ -0.58
HERC2-207ENST00000564734 VPS13CQ709C8 3753 aa11.46□□□□□ -0.58
HERC2-207ENST00000564734 KLLNB2CW77 178 aa11.46□□□□□ -0.58
HERC2-207ENST00000564734 RPL39LQ96EH5 51 aaKnown RBP11.46□□□□□ -0.58
HERC2-207ENST00000564734 CST9LQ9H4G1 147 aa11.46□□□□□ -0.58
HERC2-207ENST00000564734 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.58
HERC2-207ENST00000564734 PRRC2AP48634 2157 aaKnown RBP11.46□□□□□ -0.58
HERC2-207ENST00000564734 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 K7EMI3 77 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 SLC25A16P16260 332 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 CDKN1BP46527 198 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 ORMDL2Q53FV1 153 aa11.45□□□□□ -0.58
HERC2-207ENST00000564734 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 B4DSR2 109 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
HERC2-207ENST00000564734 H3BUT2 72 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 GAGE12BA1L429 117 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 PSMB8P28062 276 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 LINC00315P59091 139 aa11.44□□□□□ -0.58
HERC2-207ENST00000564734 SRD5A1P18405 259 aa11.43□□□□□ -0.58
HERC2-207ENST00000564734 PLNP26678 52 aa11.43□□□□□ -0.58
HERC2-207ENST00000564734 FXYD2P54710 66 aa11.43□□□□□ -0.58
HERC2-207ENST00000564734 TMEM95Q3KNT9 176 aa11.43□□□□□ -0.58
HERC2-207ENST00000564734 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
HERC2-207ENST00000564734 SONP18583 2426 aaKnown RBP11.43□□□□□ -0.58
HERC2-207ENST00000564734 H7C1H1 209 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 K7EP34 96 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
HERC2-207ENST00000564734 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 OCIAD2Q56VL3 154 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
HERC2-207ENST00000564734 F8VRH5 84 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 COTL1Q14019 142 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 AP1S3Q96PC3 154 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 SCGB3A1Q96QR1 104 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 VPS25Q9BRG1 176 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
HERC2-207ENST00000564734 GATA3P23771 443 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 RAB37Q96AX2 223 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 MGPP08493 103 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 GCSHP23434 173 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 ID1P41134 155 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 GTF2H5Q6ZYL4 71 aa11.41□□□□□ -0.58
HERC2-207ENST00000564734 PHLDA1Q8WV24 401 aaPredicted RBP11.41□□□□□ -0.58
HERC2-207ENST00000564734 A0A1W2PPM0 123 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 A0A087WW49 117 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 DSCR9P59020 149 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 CEND1Q8N111 149 aa11.4□□□□□ -0.58
HERC2-207ENST00000564734 PPP1R17O96001 155 aa11.4□□□□□ -0.59
HERC2-207ENST00000564734 C10orf99Q6UWK7 81 aa11.4□□□□□ -0.59
HERC2-207ENST00000564734 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.59
HERC2-207ENST00000564734 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms