RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 LAMC3Q9Y6N6 1575 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 STRCQ7RTU9 1775 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 PLXNA2O75051 1894 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 TRPM7Q96QT4 1865 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 SCN3AQ9NY46 2000 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.66□□□□□ -2.14
CNOT1-203ENST00000562046 SHROOM2Q13796 1616 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 CCDC180Q9P1Z9 1646 aa1.66□□□□□ -2.14
CNOT1-203ENST00000562046 MYO18AQ92614 2054 aaKnown RBP1.65□□□□□ -2.14
CNOT1-203ENST00000562046 EML5Q05BV3 1969 aa1.65□□□□□ -2.14
CNOT1-203ENST00000562046 CPAMD8Q8IZJ3 1885 aa1.65□□□□□ -2.14
CNOT1-203ENST00000562046 PPRC1Q5VV67 1664 aaKnown RBP1.65□□□□□ -2.15
CNOT1-203ENST00000562046 TRAV7A0A075B6U4 112 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 GNRH2O43555 120 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 SSSCA1O60232 199 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 CREBL2O60519 120 aaPredicted RBP1.65□□□□□ -2.15
CNOT1-203ENST00000562046 SNRNP200O75643 2136 aaKnown RBP1.65□□□□□ -2.15
CNOT1-203ENST00000562046 SNCGO76070 127 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 APOC3P02656 99 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 SLC25A6P12236 298 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 DEFA4P12838 97 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 NFYAP23511 347 aaPredicted RBP1.65□□□□□ -2.15
CNOT1-203ENST00000562046 DPPA3Q6W0C5 159 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 LINC00299Q6ZSB3 139 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 Q8N814 137 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 Q8N8P6 123 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 VSTM2AQ8TAG5 236 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 S100A13Q99584 98 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 LINC00467Q9BRT7 94 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 TMEM242Q9NWH2 141 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 LY96Q9Y6Y9 160 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 KNDC1Q76NI1 1749 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 SUPT6HQ7KZ85 1726 aaKnown RBP1.65□□□□□ -2.15
CNOT1-203ENST00000562046 DOCK10Q96BY6 2186 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 C10orf71Q711Q0 1435 aa1.65□□□□□ -2.15
CNOT1-203ENST00000562046 TET3O43151 1660 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 COL24A1Q17RW2 1714 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 IGKV2D-26A0A0A0MRZ7 120 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 TRAV14DV4A0A0A6YYC5 116 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 TRBV10-2A0A0K0K1G8 114 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 IGLC7A0M8Q6 106 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 J3QLW9 94 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 LYRM1O43325 122 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 PROSCO94903 275 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 UBL3O95164 117 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 SFT2D2O95562 160 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 IL5P05113 134 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 SNCAP37840 140 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 ASIPP42127 132 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 ROMO1P60602 79 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 INSL4Q14641 139 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 FAM27BQ5VT28 67 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 C12orf73Q69YU5 71 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 LYZL1Q6UWQ5 148 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 Q6ZQT0 140 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 TSKUQ8WUA8 353 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 SPTSSAQ969W0 71 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 Q9BRP9 147 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 FAM215AQ9Y5M1 114 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 TMEM131LA2VDJ0 1609 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 MAGI3Q5TCQ9 1506 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 ARHGEF12Q9NZN5 1544 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 KIF21AQ7Z4S6 1674 aa1.64□□□□□ -2.15
CNOT1-203ENST00000562046 INO80Q9ULG1 1556 aaPredicted RBP1.64□□□□□ -2.15
CNOT1-203ENST00000562046 DOCK2Q92608 1830 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 PXDNQ92626 1479 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 ABCA10Q8WWZ4 1543 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 DISP1Q96F81 1524 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 TRAV3A0A0B4J244 114 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 IGHV1-24A0A0C4DH33 117 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 hDV103S1A0JD37 113 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 TMEM235A6NFC5 223 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 F8W1H4 67 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 H3BPC8 53 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 GNGT2O14610 69 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 PDCD5O14737 125 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 CYB5AP00167 134 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 SSR2P43308 183 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 FXYD2P54710 66 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 ATP5EP56381 51 aaPredicted RBP1.63□□□□□ -2.15
CNOT1-203ENST00000562046 RPL26P61254 145 aaKnown RBP1.63□□□□□ -2.15
CNOT1-203ENST00000562046 UBE2L3P68036 154 aaKnown RBP1.63□□□□□ -2.15
CNOT1-203ENST00000562046 ESRGQ1W209 222 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 C5orf38Q86SI9 138 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 FAM19A2Q8N3H0 131 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 LINC00301Q8NCQ3 95 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 TSLPQ969D9 159 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 Q96M85 177 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 PMCHL2Q9BQD1 86 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 C20orf78Q9BR46 151 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 SLC50A1Q9BRV3 221 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 CST11Q9H112 138 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 SMCO4Q9NRQ5 59 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 NHP2Q9NX24 153 aaKnown RBP1.63□□□□□ -2.15
CNOT1-203ENST00000562046 UQCR10Q9UDW1 63 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 MUC6Q6W4X9 2439 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 MUC4Q99102 2169 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 CASP8AP2Q9UKL3 1982 aa1.63□□□□□ -2.15
CNOT1-203ENST00000562046 TANC1Q9C0D5 1861 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms