RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.07
NEIL1-202ENST00000561643 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.07
NEIL1-202ENST00000561643 GATA1P15976 413 aaPredicted RBP8.39□□□□□ -1.07
NEIL1-202ENST00000561643 FOXI1Q12951 378 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 C19orf84I3L1E1 186 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 TRGV3P03979 118 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 Q6ZUT4 128 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 ITLN2Q8WWU7 325 aaPredicted RBP8.39□□□□□ -1.07
NEIL1-202ENST00000561643 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
NEIL1-202ENST00000561643 PRSS1P07477 247 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 GNLYP22749 145 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 BRD3OSQ6XYD6 125 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 PSMG3-AS1Q96PY0 264 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
NEIL1-202ENST00000561643 FASNP49327 2511 aaKnown RBP8.38□□□□□ -1.07
NEIL1-202ENST00000561643 ZC2HC1BQ5TFG8 222 aa8.38□□□□□ -1.07
NEIL1-202ENST00000561643 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
NEIL1-202ENST00000561643 NFE4Q86UQ8 179 aa8.38□□□□□ -1.07
NEIL1-202ENST00000561643 MAPKAPK5-AS1Q8N8E1 139 aa8.38□□□□□ -1.07
NEIL1-202ENST00000561643 TRAV40A0A0B4J280 105 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 TGFAP01135 160 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV4-39P01824 125 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 CFAP46Q8IYW2 2715 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 CENPEQ02224 2701 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 FAM223BA6NKX1 122 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 FAM223AQ8IWN6 122 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 HIST1H4GQ99525 98 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 PRORYQ9H606 182 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 U3KQE9 123 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 Q6ZQT7 251 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 FOXC2Q99958 501 aa8.37□□□□□ -1.07
NEIL1-202ENST00000561643 CHD6Q8TD26 2715 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV1-69DA0A0B4J2H0 117 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV1-69P01742 117 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 IGKCP01834 107 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
NEIL1-202ENST00000561643 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
NEIL1-202ENST00000561643 TMEM160Q9NX00 188 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 LY6EQ16553 131 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 TMEM158Q8WZ71 300 aa8.36□□□□□ -1.07
NEIL1-202ENST00000561643 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 LINC01546A6NGU7 62 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 H3BVH4 76 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 TRBV12-3P01733 135 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 UNQ9165/PRO28630Q6UXU0 137 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 TEX29Q8N6K0 151 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 Q8N8P6 123 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
NEIL1-202ENST00000561643 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 NOTCH2Q04721 2471 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 TMEM8BA6NDV4 472 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 NHLRC4P0CG21 123 aaPredicted RBP8.35□□□□□ -1.07
NEIL1-202ENST00000561643 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 PTPN13Q12923 2485 aa8.35□□□□□ -1.07
NEIL1-202ENST00000561643 RPL11P62913 178 aaKnown RBP8.34□□□□□ -1.07
NEIL1-202ENST00000561643 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 PIMREGQ9BSJ6 248 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV4-61A0A0C4DH41 118 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 IGHV3-11P01762 117 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 PRR9Q5T870 116 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 ZFAND6Q6FIF0 208 aa8.34□□□□□ -1.07
NEIL1-202ENST00000561643 IGF1P05019 195 aa8.34□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE7O76087 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 DPM2O94777 84 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 GAGE4Q13068 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 OR10J6PQ8NGY7 276 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 FLNCQ14315 2725 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 DOPEY2Q9Y3R5 2298 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 PSMB2P49721 201 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 FAM159AQ6UWV7 190 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
NEIL1-202ENST00000561643 USP9XQ93008 2570 aaPredicted RBP8.33□□□□□ -1.08
NEIL1-202ENST00000561643 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 NDUFA4O00483 81 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 CRIP2P52943 208 aaPredicted RBP8.32□□□□□ -1.08
NEIL1-202ENST00000561643 DEFB1P60022 68 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEIL1-202ENST00000561643 LAGE3Q14657 143 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 MORN3Q6PF18 240 aaPredicted RBP8.32□□□□□ -1.08
NEIL1-202ENST00000561643 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 NRACQ8N912 160 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 MYOZ3Q8TDC0 251 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 H3BUX3 64 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms