RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 G3V4G9 280 aa10.96□□□□□ -0.65
SPG11-210ENST00000558319 TAX1BP3O14907 124 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 NCR3O14931 201 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 PTH2Q96A98 100 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 BUB3O43684 328 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 LOXP28300 417 aaPredicted RBP10.96□□□□□ -0.66
SPG11-210ENST00000558319 DEFB1P60022 68 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.66
SPG11-210ENST00000558319 SLC25A29Q8N8R3 303 aa10.95□□□□□ -0.66
SPG11-210ENST00000558319 RNF183Q96D59 192 aa10.95□□□□□ -0.66
SPG11-210ENST00000558319 ABCA1O95477 2261 aa10.95□□□□□ -0.66
SPG11-210ENST00000558319 CRYGBP07316 175 aa10.95□□□□□ -0.66
SPG11-210ENST00000558319 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
SPG11-210ENST00000558319 SLX1AQ9BQ83 275 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 TMEM61Q8N0U2 210 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 TEN1Q86WV5 123 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 CFPP27918 469 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 IGHV4-30-2A0A087WSY4 118 aa10.94□□□□□ -0.66
SPG11-210ENST00000558319 POU2AF1Q16633 256 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
SPG11-210ENST00000558319 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 TSC2P49815 1807 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 C11orf52Q96A22 123 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 HERV-K104P63124 156 aa10.93□□□□□ -0.66
SPG11-210ENST00000558319 TNRC6AQ8NDV7 1962 aaKnown RBP10.93□□□□□ -0.66
SPG11-210ENST00000558319 ZFP36P26651 326 aaKnown RBP10.92□□□□□ -0.66
SPG11-210ENST00000558319 PROK2Q9HC23 129 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 MP68P56378 58 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 NREPQ16612 68 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 MSRB1Q9NZV6 116 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 NDUFA4O00483 81 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
SPG11-210ENST00000558319 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
SPG11-210ENST00000558319 LY6G6EA0A0G2JKS1 128 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 BLCAPP62952 87 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 U3KQA8 63 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 ZNF407Q9C0G0 2248 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 GYPEP15421 78 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
SPG11-210ENST00000558319 FOXL2NBQ6ZUU3 175 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 C17orf82Q86X59 251 aaPredicted RBP10.91□□□□□ -0.66
SPG11-210ENST00000558319 C1orf147Q96MC9 270 aaPredicted RBP10.91□□□□□ -0.66
SPG11-210ENST00000558319 PKIGQ9Y2B9 76 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 Q8NFD4 153 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 LGALS9O00182 355 aa10.91□□□□□ -0.66
SPG11-210ENST00000558319 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
SPG11-210ENST00000558319 TNRC6BQ9UPQ9 1833 aaKnown RBP10.9□□□□□ -0.66
SPG11-210ENST00000558319 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
SPG11-210ENST00000558319 TRAV23DV6A0A075B6W5 121 aa10.9□□□□□ -0.66
SPG11-210ENST00000558319 LMO1P25800 156 aa10.9□□□□□ -0.67
SPG11-210ENST00000558319 ZNF491Q8N8L2 437 aa10.9□□□□□ -0.67
SPG11-210ENST00000558319 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
SPG11-210ENST00000558319 EP300Q09472 2414 aaPredicted RBP10.89□□□□□ -0.67
SPG11-210ENST00000558319 RHOHQ15669 191 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 WNK2Q9Y3S1 2297 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 C15orf65H3BRN8 121 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 LINC01545Q5VT33 79 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 GP9P14770 177 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 TIRAPP58753 221 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 LYPD6Q86Y78 171 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 FAM215AQ9Y5M1 114 aa10.89□□□□□ -0.67
SPG11-210ENST00000558319 EML6Q6ZMW3 1958 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 PRR20EP86478 221 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 PRR20CP86479 221 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 PRR20DP86480 221 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 PRR20BP86481 221 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 PRR20AP86496 221 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 GVINP1Q7Z2Y8 2422 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 LECT2O14960 151 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 MLST8Q9BVC4 326 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 ARHGAP21Q5T5U3 1957 aa10.88□□□□□ -0.67
SPG11-210ENST00000558319 IGHV4OR15-8A0A075B7B6 117 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 A0A087WW49 117 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 ZNF503Q96F45 646 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 DEFB135Q30KP9 77 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 SEM1Q6ZVN7 128 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 GATA3P23771 443 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 KIAA1671Q9BY89 1806 aa10.87□□□□□ -0.67
SPG11-210ENST00000558319 RLFQ13129 1914 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 OPRPNQ99935 248 aaPredicted RBP10.86□□□□□ -0.67
SPG11-210ENST00000558319 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 LYPD6BQ8NI32 183 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
SPG11-210ENST00000558319 RMI2Q96E14 147 aa10.85□□□□□ -0.67
SPG11-210ENST00000558319 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
SPG11-210ENST00000558319 MT-ATP8P03928 68 aa10.85□□□□□ -0.67
SPG11-210ENST00000558319 DEFB113Q30KQ7 82 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms