RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 C1orf196B1AJZ1 125 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 H3BMG7 143 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 K7EIL1 84 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 OR2T1O43869 369 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 SH2D1AO60880 128 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 MT-ND4LP03901 98 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 COL8A2P25067 703 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 TGFBR1P36897 503 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 Q5XG85 94 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 TMEM14EPQ6UXP3 125 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 PHF5AQ7RTV0 110 aaKnown RBP2.71□□□□□ -1.98
LRRC28-205ENST00000558248 SPATA12Q7Z6I5 190 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 CTAGE3PQ8IX95 158 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 MIR7-3HGQ8N6C7 128 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 PRR34Q9NV39 138 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 TP73-AS1Q9UF72 201 aa2.71□□□□□ -1.98
LRRC28-205ENST00000558248 MCTS1Q9ULC4 181 aaKnown RBP2.71□□□□□ -1.98
LRRC28-205ENST00000558248 A0A087X0T9 212 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 A6NED7 52 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 C11orf94C9JXX5 98 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 BUB1B-PAK6H3BSN5 160 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 SLC25A20O43772 301 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 NCR2O95944 276 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 IGLV1-47P01700 117 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 IGLC6P0CF74 106 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 LINC00694P0DN24 101 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 CGB3P0DN86 165 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 CGB7P0DN87 165 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 FABP2P12104 132 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 FGF7P21781 194 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 TMBIM6P55061 237 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 DSCR4P56555 118 aaPredicted RBP2.7□□□□□ -1.98
LRRC28-205ENST00000558248 RBM11P57052 281 aaKnown RBP2.7□□□□□ -1.98
LRRC28-205ENST00000558248 PPP3R1P63098 170 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 NNATQ16517 81 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 C10orf91Q5T1B1 145 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF880Q6PDB4 577 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF322Q6U7Q0 402 aaPredicted RBP2.7□□□□□ -1.98
LRRC28-205ENST00000558248 RNF175Q8N4F7 328 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 LINC00612Q8N6U2 182 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 STAG3L4Q8TBR4 150 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 DCANP1Q8TF63 244 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 C11orf1Q9H5F2 150 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF355PQ9NSJ1 428 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 TNFSF18Q9UNG2 199 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 BAIAP2Q9UQB8 552 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 RNF11Q9Y3C5 154 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 TRAPPC1Q9Y5R8 145 aa2.7□□□□□ -1.98
LRRC28-205ENST00000558248 TET2Q6N021 2002 aaPredicted RBP2.69□□□□□ -1.98
LRRC28-205ENST00000558248 TRBV24-1A0A075B6N3 115 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 TRAV13-1A0A0B4J241 112 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 A0A0J9YW62 118 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 LOC107984640A0A0U1RRK4 108 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 GGT3PA6NGU5 568 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 TMEM212A6NML5 194 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 GGTLC3B5MD39 225 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 NPFFO15130 113 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 LEPROTO15243 131 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 NAPSAO96009 420 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 IGHV1-69P01742 117 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 MPV17P39210 176 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 GUCA1AP43080 201 aaPredicted RBP2.69□□□□□ -1.98
LRRC28-205ENST00000558248 AQP4P55087 323 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 HBBP68871 147 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 MEF2BQ02080 365 aaPredicted RBP2.69□□□□□ -1.98
LRRC28-205ENST00000558248 Q6ZR54 194 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF767PQ75MW2 155 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 ACBD7Q8N6N7 88 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 TERB2Q8NHR7 220 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 PSMG3Q9BT73 122 aaPredicted RBP2.69□□□□□ -1.98
LRRC28-205ENST00000558248 MRPL32Q9BYC8 188 aaKnown RBP2.69□□□□□ -1.98
LRRC28-205ENST00000558248 NIT2Q9NQR4 276 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 OSTCQ9NRP0 149 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 TNFRSF19Q9NS68 423 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 LINC00588Q9Y4M8 146 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 U3KQK5 164 aa2.69□□□□□ -1.98
LRRC28-205ENST00000558248 HERC2O95714 4834 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 TRGV10A0A0A0MS01 117 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 MDFIC2A0A1B0GVS7 189 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 APOC4-APOC2K7ER74 178 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 NDUFB3O43676 98 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 APOC2P02655 101 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 PSMB8P28062 276 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 RAB5CP51148 216 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 AKR1D1P51857 326 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 UBE2BP63146 152 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF705AQ6ZN79 300 aaPredicted RBP2.68□□□□□ -1.98
LRRC28-205ENST00000558248 LYZL2Q7Z4W2 148 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 BPIFA4PQ86YQ2 179 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 C8orf59Q8N0T1 100 aaPredicted RBP2.68□□□□□ -1.98
LRRC28-205ENST00000558248 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 MUC7Q8TAX7 377 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 RBPMSQ93062 196 aaKnown RBP2.68□□□□□ -1.98
LRRC28-205ENST00000558248 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
LRRC28-205ENST00000558248 SCN3BQ9NY72 215 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 ZFP30Q9Y2G7 519 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 DOCK11Q5JSL3 2073 aa2.68□□□□□ -1.98
LRRC28-205ENST00000558248 RYR1P21817 5038 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 STAB2Q8WWQ8 2551 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms