RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SETD2Q9BYW2 2564 aaPredicted RBP5.43□□□□□ -1.54
SPG11-204ENST00000557866 TRAV12-2A0A075B6T6 113 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 LOC102724200A0A096LPH7 203 aaPredicted RBP5.43□□□□□ -1.54
SPG11-204ENST00000557866 A0A1B0GW15 77 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 C7orf71A4D174 169 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 M0R2Z0 102 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 GNRH2O43555 120 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 DUSP14O95147 198 aaKnown RBP5.43□□□□□ -1.54
SPG11-204ENST00000557866 HLA-DRB4P13762 266 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 NTF3P20783 257 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 SPINK13Q1W4C9 94 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 ODF3L2Q3SX64 289 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 C18orf32Q8TCD1 76 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 RCHY1Q96PM5 261 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 HLA-DRB4X5D2U9 266 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 C2CD3Q4AC94 2353 aa5.43□□□□□ -1.54
SPG11-204ENST00000557866 SETXQ7Z333 2677 aaKnown RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 F8P00451 2351 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 IGHV4-4A0A075B6R2 117 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 TRAV12-3A0A0B4J271 114 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 OR4C46A6NHA9 309 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 H3BVH4 76 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 CRXO43186 299 aaPredicted RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 SERF1AO75920 110 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 IGLV1-51P01701 117 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 S100A8P05109 93 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 OR5AL1P0C617 328 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 RBMY1A1P0DJD3 496 aaKnown RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 RBMY1CP0DJD4 496 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 ESDP10768 282 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 RNASE3P12724 160 aaKnown RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 FABP4P15090 132 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 FXYD7P58549 80 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 RBMY1FQ15415 496 aaKnown RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 TWIST1Q15672 202 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 MRPL51Q4U2R6 128 aaKnown RBP5.42□□□□□ -1.54
SPG11-204ENST00000557866 OR10J3Q5JRS4 329 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 DNLZQ5SXM8 178 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 FAM104BQ5XKR9 115 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 Q6ZSN1 163 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 BAGE3Q86Y29 109 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 AMN1Q8IY45 258 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 OR10D4PQ8NGN7 298 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 OR10AG1Q8NH19 301 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 BORCS7Q96B45 105 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 RNF185Q96GF1 192 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 URB1-AS1Q96HZ7 61 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 SCRT2Q9NQ03 307 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 U3KQK5 164 aa5.42□□□□□ -1.54
SPG11-204ENST00000557866 WNK1Q9H4A3 2382 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 SAP30O75446 220 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 GAS8-AS1O95177 125 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 SLPIP03973 132 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 TSPOP30536 169 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 CDKN1BP46527 198 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 CITED1Q99966 193 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 TMEM191AQ9H0A3 160 aa5.41□□□□□ -1.54
SPG11-204ENST00000557866 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
SPG11-204ENST00000557866 IGHV3-16A0A0C4DH30 117 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 SMKR1H3BMG3 65 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 CD7P09564 240 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 RAB4AP20338 218 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 S100A2P29034 98 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 ASIPP42127 132 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 CACNG7P62955 275 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 BEAN1Q3B7T3 259 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 TDRG1Q3Y452 100 aa5.4□□□□□ -1.54
SPG11-204ENST00000557866 PACRGQ96M98 296 aaPredicted RBP5.4□□□□□ -1.54
SPG11-204ENST00000557866 SORL1Q92673 2214 aa5.4□□□□□ -1.55
SPG11-204ENST00000557866 BAHCC1Q9P281 2608 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 IGHV1OR15-1A0A075B7D0 117 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 D6R8Y8 96 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 NXPH4O95158 308 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 PRM2P04554 102 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
SPG11-204ENST00000557866 EVI2AP22794 236 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 S100A4P26447 101 aaKnown RBP5.39□□□□□ -1.55
SPG11-204ENST00000557866 PYY3Q5JQD4 70 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 FAM159AQ6UWV7 190 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 NIT1Q86X76 327 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 OR2K2Q8NGT1 345 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 KCNS1Q96KK3 526 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 C9orf85Q96MD7 179 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 CLUHP3Q96NS8 147 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 WFDC10AQ9H1F0 79 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 MDFICQ9P1T7 246 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 TRRAPQ9Y4A5 3859 aa5.39□□□□□ -1.55
SPG11-204ENST00000557866 NIPBLQ6KC79 2804 aaeCLIP5.39□□□□□ -1.55
SPG11-204ENST00000557866 CMYA5Q8N3K9 4069 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 NCR2O95944 276 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 NPYP01303 97 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 SMIM6P0DI80 62 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 KRTAP24-1Q3LI83 254 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 SPANXN1Q5VSR9 72 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 Q6ZWC4 215 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 TRPT1Q86TN4 253 aaKnown RBP5.38□□□□□ -1.55
SPG11-204ENST00000557866 FAM19A2Q8N3H0 131 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms