RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 OR8A1Q8NGG7 326 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 OR2K2Q8NGT1 345 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 DCANP1Q8TF63 244 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 PGLYRP4Q96LB8 373 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 PACRGQ96M98 296 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-212ENST00000556810 AGPAT4-IT1Q9H0P7 198 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 MS4A6AQ9H2W1 248 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 K7EQG2 157 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 CCL24O00175 119 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 SOCS3O14543 225 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 SPINK4O60575 86 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 AMBPP02760 352 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 PPBPP02775 128 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 SMIM6P0DI80 62 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 PMCHP20382 165 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 S100A4P26447 101 aaKnown RBP4.5□□□□□ -1.69
TMEM260-212ENST00000556810 CAMPP49913 170 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 FAM159AQ6UWV7 190 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 C12orf54Q6X4T0 127 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-212ENST00000556810 FOXI2Q6ZQN5 318 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 RNF182Q8N6D2 247 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 FER1L6-AS1Q8NA97 138 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 SPAG8Q99932 426 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-212ENST00000556810 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
TMEM260-212ENST00000556810 IGKV3-7A0A075B6H7 116 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 PHOX2AO14813 284 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 PPP1R17O96001 155 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 CA1P00915 261 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-212ENST00000556810 HLA-DMBP28068 263 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 CRIP1P50238 77 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
TMEM260-212ENST00000556810 ERCC8Q13216 396 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 C10orf99Q6UWK7 81 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 ZNF493Q6ZR52 646 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 NDUFA11Q86Y39 141 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 APRG1Q8IVJ8 170 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.49□□□□□ -1.69
TMEM260-212ENST00000556810 ESM1Q9NQ30 184 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 LAMTOR2Q9Y2Q5 125 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
TMEM260-212ENST00000556810 A0A0J9YX75 114 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 PRAC2D3DTV9 90 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 OR5AL1P0C617 328 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 ESDP10768 282 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 SRIP30626 198 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 CTRLP40313 264 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 ASIPP42127 132 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 CDKN1BP46527 198 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 INSL3P51460 131 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 S100A12P80511 92 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 PSMG4Q5JS54 123 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 DNLZQ5SXM8 178 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 HIST3H2BBQ8N257 126 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 CHCHD1Q96BP2 118 aaKnown RBP4.48□□□□□ -1.69
TMEM260-212ENST00000556810 FAM19A4Q96LR4 140 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 C20orf144Q9BQM9 153 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 CNFNQ9BYD5 112 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 SAMD10Q9BYL1 202 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 TMEM191AQ9H0A3 160 aa4.48□□□□□ -1.69
TMEM260-212ENST00000556810 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 HSBP1O75506 76 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 CSN3P07498 182 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 ARMS2P0C7Q2 107 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 ZNF688P0C7X2 276 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 IGLC6P0CF74 106 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 CD28P10747 220 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 NTF3P20783 257 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 G0S2P27469 103 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 TFPI2P48307 235 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 DEFB114Q30KQ6 69 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 HIST2H2BDQ6DRA6 164 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 ORMDL3Q8N138 153 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 Q8TAT8 98 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 DLX4Q92988 240 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-212ENST00000556810 GPR61Q9BZJ8 451 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
TMEM260-212ENST00000556810 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 LOC102724200A0A096LPH7 203 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-212ENST00000556810 C7orf71A4D174 169 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 KLLNB2CW77 178 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 SNAI2O43623 268 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 LINC00614P0C842 121 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 GZMBP10144 247 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 FABP4P15090 132 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 CKS2P33552 79 aa4.46□□□□□ -1.7
TMEM260-212ENST00000556810 RNASE4P34096 147 aaKnown RBP4.46□□□□□ -1.7
TMEM260-212ENST00000556810 ZNF80P51504 273 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-212ENST00000556810 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
TMEM260-212ENST00000556810 SLAQ13239 276 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms