RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FAM110DQ8TAY7 271 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-241ENST00000556374 TMEM158Q8WZ71 300 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 METTL26Q96S19 204 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 ASCL2Q99929 193 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 SIGLEC8Q9NYZ4 499 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 DSCAMO60469 2012 aa3.39□□□□□ -1.87
ATXN3-241ENST00000556374 PKD1L1Q8TDX9 2849 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
ATXN3-241ENST00000556374 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 A0A1W2PRD5 423 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 TMEM213A2RRL7 107 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 LYNX1G3V0Z9 82 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 H3BRM9 83 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 NCR2O95944 276 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV3-23P01764 117 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 LYNX1P0DP58 116 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 FABP2P12104 132 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 RHOGP84095 191 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 MRPL51Q4U2R6 128 aaKnown RBP3.38□□□□□ -1.87
ATXN3-241ENST00000556374 LDLRAD2Q5SZI1 272 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 SPANXN1Q5VSR9 72 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 COX8CQ7Z4L0 72 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 Q8TAT8 98 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 LINC01560Q8TB33 94 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
ATXN3-241ENST00000556374 C17orf77Q96MU5 243 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 UFC1Q9Y3C8 167 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 S4R3C0 116 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 U3KQK5 164 aa3.38□□□□□ -1.87
ATXN3-241ENST00000556374 HEATR1Q9H583 2144 aaKnown RBP3.37□□□□□ -1.87
ATXN3-241ENST00000556374 TRBV7-1A0A0A6YYK4 115 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 K7EP34 96 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
ATXN3-241ENST00000556374 CRLF1O75462 422 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 DPM2O94777 84 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 NPYP01303 97 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 IGKCP01834 107 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 PRSS1P07477 247 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 PLNP26678 52 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 FCER1GP30273 86 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 C15orf32Q32M92 178 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 KLF17Q5JT82 389 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-241ENST00000556374 AMMECR1LQ6DCA0 310 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 C1orf122Q6ZSJ8 110 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 C9orf139Q6ZV77 190 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 C18orf15Q96N68 181 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 MCRIP2Q9BUT9 160 aaKnown RBP3.37□□□□□ -1.87
ATXN3-241ENST00000556374 NPFFR1Q9GZQ6 430 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
ATXN3-241ENST00000556374 SVEP1Q4LDE5 3571 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV7-81A0A0B4J1V7 117 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 A0A0G2JLM5 398 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 FAM223BA6NKX1 122 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 SMKR1H3BMG3 65 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 H3BUT2 72 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 J3QR89 54 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 TNFRSF6BO95407 300 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 PPP1R17O96001 155 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 CLEC3BP05452 202 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 IGLC6P0CF74 106 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 SMIM13P0DJ93 91 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 S100A4P26447 101 aaKnown RBP3.36□□□□□ -1.87
ATXN3-241ENST00000556374 LEPP41159 167 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 CRIP1P50238 77 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 NDPQ00604 133 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 SCGB2A2Q13296 93 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 DEFB113Q30KQ7 82 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 ANXA2RQ3ZCQ2 193 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 OCIAD2Q56VL3 154 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 LYRM7Q5U5X0 104 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 C2orf91Q6ZV80 131 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 Q6ZVH6 145 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 ERASQ7Z444 233 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 FAM223AQ8IWN6 122 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 Q8N6K4 173 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 Q8N8P6 123 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 OR2K2Q8NGT1 345 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 OR10J6PQ8NGY7 276 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF502Q8TBZ5 544 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 RNASE8Q8TDE3 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-241ENST00000556374 ATP6V0BQ99437 205 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 CHAC1Q9BUX1 264 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 UBTD1Q9HAC8 227 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 MOB4Q9Y3A3 225 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 LENEPQ9Y5L5 61 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 SPCS1Q9Y6A9 102 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 USF3Q68DE3 2245 aa3.36□□□□□ -1.87
ATXN3-241ENST00000556374 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.874e-12■■■□□ 18.3
ATXN3-241ENST00000556374 TRAV21A0A0B4J279 112 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms