RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 DEFB125Q8N687 156 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 ZNF503Q96F45 646 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 MPV17L2Q567V2 206 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 C16orf54Q6UWD8 224 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 DEFB105AQ8NG35 78 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 PKIGQ9Y2B9 76 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 MYLKQ15746 1914 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 IGHG2P01859 326 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 MSMPQ1L6U9 139 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 RNF152Q8N8N0 203 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 HEATR5AQ86XA9 2040 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 RBMY1FQ15415 496 aaKnown RBP6.37□□□□□ -1.39
SYNE2-220ENST00000555612 V9GYV3 84 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 A6NDX4 124 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 COA6Q5JTJ3 125 aaKnown RBP6.37□□□□□ -1.39
SYNE2-220ENST00000555612 FAM231DQ6ZW35 169 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
SYNE2-220ENST00000555612 RBAKDNA6NC62 111 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 LTAP01374 205 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 SH2D6Q7Z4S9 175 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 IL17DQ8TAD2 202 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 IGHV4-4A0A075B6R2 117 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 C9JAW5 83 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 INSL3P51460 131 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 KRTAP27-1Q3LI81 207 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 A8MWP6 167 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 CRYGCP07315 174 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 KIR3DS1Q14943 382 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 C20orf78Q9BR46 151 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 PROP1O75360 226 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 BOD1L2Q8IYS8 172 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 TMEM61Q8N0U2 210 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 HHLA3Q9XRX5 114 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 LY6G6DO95868 133 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 NDUFA11Q86Y39 141 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
SYNE2-220ENST00000555612 LENEPQ9Y5L5 61 aa6.36□□□□□ -1.39
SYNE2-220ENST00000555612 C10orf142B7Z368 130 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 DEFB1P60022 68 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 LMO4P61968 165 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 SPG11Q96JI7 2443 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 MED13Q9UHV7 2174 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 SMIM27A0A1W2PRY6 76 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 TNFRSF13BO14836 293 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-220ENST00000555612 IGLV1-47P01700 117 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 ZNF124Q15973 351 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 ETDCA0A1B0GVM5 59 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 C11orf45Q8TAV5 145 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 SOCS3O14543 225 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 TIMM17AQ99595 171 aa6.35□□□□□ -1.39
SYNE2-220ENST00000555612 ADAMTS9Q9P2N4 1935 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 TMEM89A2RUT3 159 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 RNF183Q96D59 192 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 TM2D2Q9BX73 214 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 MORN5Q5VZ52 161 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 CACNA1AO00555 2505 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 K7EMT4 169 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 COX7A2LO14548 114 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 Q0VG73 95 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 Q8N1Y9 231 aa6.34□□□□□ -1.39
SYNE2-220ENST00000555612 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-220ENST00000555612 PCP4P48539 62 aa6.34□□□□□ -1.4
SYNE2-220ENST00000555612 PLCE1Q9P212 2302 aa6.34□□□□□ -1.4
SYNE2-220ENST00000555612 TRAV4A0A0B4J268 109 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 J3QQQ9 107 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 NDUFS5O43920 106 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 SLC25A29Q8N8R3 303 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 RPL39LQ96EH5 51 aaKnown RBP6.33□□□□□ -1.4
SYNE2-220ENST00000555612 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 Q9H8V8 135 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 KIF26AQ9ULI4 1882 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-220ENST00000555612 TEX22C9J3V5 150 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 IGLL1P15814 213 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 Q6YL49 198 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 Q6ZWC4 215 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 COL4A3Q01955 1670 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 HAMPP81172 84 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 C15orf53Q8NAA6 179 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 KLK12Q9UKR0 248 aa6.33□□□□□ -1.4
SYNE2-220ENST00000555612 F8VRH5 84 aa6.32□□□□□ -1.4
SYNE2-220ENST00000555612 C11orf52Q96A22 123 aa6.32□□□□□ -1.4
SYNE2-220ENST00000555612 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
SYNE2-220ENST00000555612 UBE2AP49459 152 aa6.32□□□□□ -1.4
SYNE2-220ENST00000555612 DAZ2Q13117 558 aaKnown RBP6.32□□□□□ -1.4
SYNE2-220ENST00000555612 DAZ4Q86SG3 579 aaKnown RBP6.32□□□□□ -1.4
SYNE2-220ENST00000555612 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
SYNE2-220ENST00000555612 DAZ3Q9NR90 486 aaKnown RBP6.32□□□□□ -1.4
SYNE2-220ENST00000555612 PIEZO1Q92508 2521 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms