RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 LY96Q9Y6Y9 160 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 D6R8Y8 96 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 Q6ZUT4 128 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 H3BRN7 92 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 ODF1Q14990 250 aa12.85□□□□□ -0.35
PCNX1-209ENST00000554879 IGLL5B9A064 214 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 M0QXV9 152 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 FOXI1Q12951 378 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 LTAP01374 205 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 LEPP41159 167 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 USMG5Q96IX5 58 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
PCNX1-209ENST00000554879 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.35
PCNX1-209ENST00000554879 KIR2DL4Q99706 377 aa12.83□□□□□ -0.35
PCNX1-209ENST00000554879 EBI3Q14213 229 aa12.83□□□□□ -0.36
PCNX1-209ENST00000554879 C2orf91Q6ZV80 131 aa12.83□□□□□ -0.36
PCNX1-209ENST00000554879 RASL11AQ6T310 242 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 PPDPFLQ8WWR9 84 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 LINC01549A6NIU2 74 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 CCDC179H3BU77 68 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 FOXE3Q13461 319 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 C12orf74Q32Q52 190 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 RHPN1-AS1Q9BWJ2 59 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 VPREB3Q9UKI3 123 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 IGHV4-31P0DP07 118 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 GP9P14770 177 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 ERCC8Q13216 396 aa12.82□□□□□ -0.36
PCNX1-209ENST00000554879 IGKCP01834 107 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 LOXL1Q08397 574 aaPredicted RBP12.81□□□□□ -0.36
PCNX1-209ENST00000554879 Q8N6K4 173 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 PLA2G2AP14555 144 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 MRGPRG-AS1Q2M3A8 158 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 XGP55808 180 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 Q6ZS46 218 aa12.81□□□□□ -0.36
PCNX1-209ENST00000554879 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 ARMS2P0C7Q2 107 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 HERVK_113P61574 105 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 VCX2Q9H322 139 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 C9JAW5 83 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 A6NDX4 124 aa12.8□□□□□ -0.36
PCNX1-209ENST00000554879 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
PCNX1-209ENST00000554879 C9orf153Q5TBE3 101 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 DUX3Q96PT4 197 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 Q86TA4 180 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 TRAV8-4A0A0B4J246 113 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 DPM2O94777 84 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 CEND1Q8N111 149 aa12.79□□□□□ -0.36
PCNX1-209ENST00000554879 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
PCNX1-209ENST00000554879 IGHG2P01859 326 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 DEFB136Q30KP8 78 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 RAX2Q96IS3 184 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
PCNX1-209ENST00000554879 C8orf49Q96NF6 230 aa12.77□□□□□ -0.36
PCNX1-209ENST00000554879 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
PCNX1-209ENST00000554879 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.37
PCNX1-209ENST00000554879 TRBV25-1A0A075B6N4 114 aa12.77□□□□□ -0.37
PCNX1-209ENST00000554879 EGR2P11161 476 aaPredicted RBP12.77□□□□□ -0.37
PCNX1-209ENST00000554879 SRSF1Q07955 248 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCNX1-209ENST00000554879 C10orf99Q6UWK7 81 aa12.77□□□□□ -0.37
PCNX1-209ENST00000554879 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
PCNX1-209ENST00000554879 ZNF56Q15929 161 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 PRSS2P07478 247 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 LYPD1Q8N2G4 141 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 PDE6HQ13956 83 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
PCNX1-209ENST00000554879 HIST2H2BDQ6DRA6 164 aa12.75□□□□□ -0.37
PCNX1-209ENST00000554879 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
PCNX1-209ENST00000554879 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
PCNX1-209ENST00000554879 F5H697 171 aa12.75□□□□□ -0.37
PCNX1-209ENST00000554879 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
PCNX1-209ENST00000554879 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
PCNX1-209ENST00000554879 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
PCNX1-209ENST00000554879 UNQ9165/PRO28630Q6UXU0 137 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms