RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF138P52744 262 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 MRPS10P82664 201 aaKnown RBP3.42□□□□□ -1.86
HOXB3-213ENST00000552000 ARL16Q0P5N6 197 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 C14orf177Q52M58 125 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM14EPQ6UXP3 125 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 Q6ZRG5 221 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 AP3S1Q92572 193 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 SMIM8Q96KF7 97 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 LINC01600Q96MT4 127 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 MIXL1Q9H2W2 232 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 Q9H521 79 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 KLK12Q9UKR0 248 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 WDR83OSQ9Y284 106 aa3.42□□□□□ -1.86
HOXB3-213ENST00000552000 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 ANKRD20A5PA0PJZ0 165 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 HERV-K104P63124 156 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 RAB31Q13636 194 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 PDE6HQ13956 83 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 IL18Q14116 193 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 ZNF266Q14584 549 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 TMEM128Q5BJH2 165 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 CFAP126Q5VTH2 177 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 Q6AWC8 147 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 DPPA3Q6W0C5 159 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 C2orf50Q96LR7 162 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 OR51M1Q9H341 326 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 AAMDCQ9H7C9 122 aa3.41□□□□□ -1.86
HOXB3-213ENST00000552000 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 GAGE12JA6NER3 117 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 RGS5O15539 181 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 SFT2D2O95562 160 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 PRSS1P07477 247 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 SEC11BP0C7V7 166 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 CAV2P51636 162 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 GAGE1Q13065 139 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 GAGE4Q13068 117 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 GAGE5Q13069 117 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 PPP1R1AQ13522 171 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 NIT1Q86X76 327 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 C12orf45Q8N5I9 185 aaPredicted RBP3.4□□□□□ -1.87
HOXB3-213ENST00000552000 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
HOXB3-213ENST00000552000 DPH3Q96FX2 82 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 ZC2HC1AQ96GY0 325 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 PFDN5Q99471 154 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 VCX3AQ9NNX9 186 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 TMEM14CQ9P0S9 112 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 URGCP-MRPS24S4R325 110 aa3.4□□□□□ -1.87
HOXB3-213ENST00000552000 PHOX2AO14813 284 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 TYMSP04818 313 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 LINC00694P0DN24 101 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 ZNF876PQ49A33 203 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 ATRAIDQ6UW56 229 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 SDIM1Q6ZPB5 146 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 C9orf163Q8N9P6 203 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 MCFD2Q8NI22 146 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 DIRAS2Q96HU8 199 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 ATP5SQ99766 215 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 GGACTQ9BVM4 153 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 NAA50Q9GZZ1 169 aaKnown RBP3.39□□□□□ -1.87
HOXB3-213ENST00000552000 SH3BGRL3Q9H299 93 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 Q9UF83 564 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 KIF25-AS1Q9Y6Z4 181 aa3.39□□□□□ -1.87
HOXB3-213ENST00000552000 A0A087WWC5 75 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 A0A087WX48 190 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 A0A087WXM4 84 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 A0A087WYN8 130 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 A0A0U1RQV1 116 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 CIDEAO60543 219 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 HLA-DQA1P01909 254 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 NBEAP1P0C6P0 100 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 CHTF8P0CG12 524 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 MGST1P10620 155 aaKnown RBP3.38□□□□□ -1.87
HOXB3-213ENST00000552000 CSN1S1P47710 185 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 INPP1P49441 399 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 TAS2R30P59541 319 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
HOXB3-213ENST00000552000 ELOBQ15370 118 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 GCSAMLQ5JQS6 135 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 Q6ZNX1 250 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 Q75L30 129 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 CYB561D1Q8N8Q1 229 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 THAP6Q8TBB0 222 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 DYNC2LI1Q8TCX1 351 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 PHYHIPLQ96FC7 376 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 ALKBH7Q9BT30 221 aaPredicted RBP3.38□□□□□ -1.87
HOXB3-213ENST00000552000 SLC25A2Q9BXI2 301 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 SAMD10Q9BYL1 202 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 SDF2L1Q9HCN8 221 aa3.38□□□□□ -1.87
HOXB3-213ENST00000552000 TRAV21A0A0B4J279 112 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 UBE2L5PA0A1B0GUS4 154 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms