RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 RRN3P1Q2M238 152 aa10.2□□□□□ -0.78
CACNB3-216ENST00000550391 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
CACNB3-216ENST00000550391 BORCS7Q96B45 105 aa10.2□□□□□ -0.78
CACNB3-216ENST00000550391 RNF183Q96D59 192 aa10.2□□□□□ -0.78
CACNB3-216ENST00000550391 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
CACNB3-216ENST00000550391 TIMM8BQ9Y5J9 83 aaPredicted RBP10.2□□□□□ -0.78
CACNB3-216ENST00000550391 SNAI2O43623 268 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 AZU1P20160 251 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 ZNF493Q6ZR52 646 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 TMEM263Q8WUH6 116 aaKnown RBP10.19□□□□□ -0.78
CACNB3-216ENST00000550391 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 YPEL4Q96NS1 127 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 X6R8D5 127 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
CACNB3-216ENST00000550391 DYNC2H1Q8NCM8 4307 aaKnown RBP10.18□□□□□ -0.78
CACNB3-216ENST00000550391 A0A1B0GUT8 65 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 SPRY2O43597 315 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 CACNG7P62955 275 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 RIGQ13278 110 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 C11orf72Q8NBR9 251 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 OR11H2Q8NH07 326 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 GSN-AS1Q9NRJ2 163 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 TP53TG1Q9Y2A0 90 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
CACNB3-216ENST00000550391 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 TGIF2-C20orf24A0A0A6YYL0 155 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 SPINK4O60575 86 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
CACNB3-216ENST00000550391 SPXQ9BT56 116 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
CACNB3-216ENST00000550391 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 MUC21A0A0G2JKD1 596 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 MUC21A0A140T8X8 626 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 A0A1B0GW15 77 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 SPANXN1Q5VSR9 72 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
CACNB3-216ENST00000550391 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 OVOL2Q9BRP0 275 aa10.16□□□□□ -0.78
CACNB3-216ENST00000550391 COLCA2A8K830 154 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 M0R2P5 195 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 MIFP14174 115 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 NTF3P20783 257 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 SSTP61278 116 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 TWIST1Q15672 202 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 ZFP82Q8N141 532 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 IL17DQ8TAD2 202 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 FAM210BQ96KR6 192 aa10.15□□□□□ -0.78
CACNB3-216ENST00000550391 MUC4Q99102 2169 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 M0R381 172 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 NXPH4O95158 308 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 S100A8P05109 93 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 HBBP68871 147 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
CACNB3-216ENST00000550391 COX19Q49B96 90 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 PTH2Q96A98 100 aa10.14□□□□□ -0.79
CACNB3-216ENST00000550391 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 PIK3CD-AS1Q5SR53 167 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 DMRTA1Q5VZB9 504 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 TM2D3Q9BRN9 247 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 RETNQ9HD89 108 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 DNAH1Q9P2D7 4330 aa10.13□□□□□ -0.79
CACNB3-216ENST00000550391 IGHV4-28A0A0C4DH34 117 aa10.12□□□□□ -0.79
CACNB3-216ENST00000550391 CAMPP49913 170 aa10.12□□□□□ -0.79
CACNB3-216ENST00000550391 Q8NAQ8 132 aa10.12□□□□□ -0.79
CACNB3-216ENST00000550391 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
CACNB3-216ENST00000550391 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
CACNB3-216ENST00000550391 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
CACNB3-216ENST00000550391 TRGC1P0CF51 173 aa10.11□□□□□ -0.79
CACNB3-216ENST00000550391 RAB5AP20339 215 aa10.11□□□□□ -0.79
CACNB3-216ENST00000550391 LGALS9BQ3B8N2 356 aa10.11□□□□□ -0.79
CACNB3-216ENST00000550391 SMIM15Q7Z3B0 74 aa10.11□□□□□ -0.79
CACNB3-216ENST00000550391 NDUFAF3Q9BU61 184 aa10.11□□□□□ -0.79
CACNB3-216ENST00000550391 TRGV1A0A0A0MS02 117 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 EMP1P54849 157 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 RAB4BP61018 213 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-216ENST00000550391 GATD1Q8NB37 220 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 RASL10AQ92737 203 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 B9D2Q9BPU9 175 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 GNB1LQ9BYB4 327 aa10.1□□□□□ -0.79
CACNB3-216ENST00000550391 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
CACNB3-216ENST00000550391 AP1S3Q96PC3 154 aa10.09□□□□□ -0.79
CACNB3-216ENST00000550391 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
CACNB3-216ENST00000550391 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
CACNB3-216ENST00000550391 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
CACNB3-216ENST00000550391 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
CACNB3-216ENST00000550391 A8MWV9 139 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms