RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
RTN3-214ENST00000545432 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
RTN3-214ENST00000545432 CIRBPQ14011 172 aaKnown RBP9.43□□□□□ -0.9
RTN3-214ENST00000545432 ELOBQ15370 118 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 TRIQKQ629K1 86 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 GOLT1AQ6ZVE7 132 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 OR5C1Q8NGR4 320 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 KCNIP2Q9NS61 270 aa9.43□□□□□ -0.9
RTN3-214ENST00000545432 CENPXA8MT69 81 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 A8MWV9 139 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 PANO1I0J062 215 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 TAAR5O14804 337 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 Q0VG73 95 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 CMTM2Q8TAZ6 248 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 HYLS1Q96M11 299 aa9.42□□□□□ -0.9
RTN3-214ENST00000545432 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
RTN3-214ENST00000545432 S100A10P60903 97 aa9.41□□□□□ -0.9
RTN3-214ENST00000545432 ENHOQ6UWT2 76 aa9.41□□□□□ -0.9
RTN3-214ENST00000545432 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
RTN3-214ENST00000545432 A0A0D9SG52 128 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 PLA2G10O15496 165 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 ASIPP42127 132 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 TAS2R45P59539 299 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 KHDC3LQ587J8 217 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 FAM74A1Q5RGS3 127 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
RTN3-214ENST00000545432 NMES1Q9C002 83 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 MBD2Q9UBB5 411 aa9.4□□□□□ -0.9
RTN3-214ENST00000545432 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 C17orf112F2Z3M2 114 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 TCRBP04435 133 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 PRSS1P07477 247 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 OR2T35Q8NGX2 323 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
RTN3-214ENST00000545432 IL7P13232 177 aa9.38□□□□□ -0.91
RTN3-214ENST00000545432 RPL19P84098 196 aaKnown RBP9.38□□□□□ -0.91
RTN3-214ENST00000545432 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
RTN3-214ENST00000545432 JPT2Q9H910 190 aa9.38□□□□□ -0.91
RTN3-214ENST00000545432 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
RTN3-214ENST00000545432 A0A087WX48 190 aa9.37□□□□□ -0.91
RTN3-214ENST00000545432 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
RTN3-214ENST00000545432 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
RTN3-214ENST00000545432 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
RTN3-214ENST00000545432 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
RTN3-214ENST00000545432 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
RTN3-214ENST00000545432 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 H0YIZ8 118 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 GCGP01275 180 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 GNG5P63218 68 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 NDFIP1Q9BT67 221 aa9.36□□□□□ -0.91
RTN3-214ENST00000545432 DNLZQ5SXM8 178 aa9.35□□□□□ -0.91
RTN3-214ENST00000545432 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
RTN3-214ENST00000545432 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
RTN3-214ENST00000545432 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
RTN3-214ENST00000545432 RHODO00212 210 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 LYRM1O43325 122 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 TCRAP04437 139 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
RTN3-214ENST00000545432 SMUG1Q53HV7 270 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 HSD17B11Q8NBQ5 300 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 ZC2HC1AQ96GY0 325 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
RTN3-214ENST00000545432 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.921e-11■■■□□ 15.7
RTN3-214ENST00000545432 UBE2D3P61077 147 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
RTN3-214ENST00000545432 UBE2D2P62837 147 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 C5orf17Q8NAS9 161 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 OR2G3Q8NGZ4 309 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 NUDT15Q9NV35 164 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 PRR34Q9NV39 138 aa9.33□□□□□ -0.92
RTN3-214ENST00000545432 MIAQ16674 131 aa9.32□□□□□ -0.92
RTN3-214ENST00000545432 TRBV6-8A0A0A6YYG3 113 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 H2AFB2P0C5Z0 115 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 FLI1Q01543 452 aaPredicted RBP9.31□□□□□ -0.92
RTN3-214ENST00000545432 KCNIP4Q6PIL6 250 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 OR10G8Q8NGN5 311 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
RTN3-214ENST00000545432 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 A0A087WYN8 130 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
RTN3-214ENST00000545432 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 SAPCD1Q5SSQ6 148 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
RTN3-214ENST00000545432 A0A0J9YXV3 536 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 FABP5P3A8MUU1 101 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 CRPP02741 224 aa9.29□□□□□ -0.92
RTN3-214ENST00000545432 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms