RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 NCOR1O75376 2440 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SPG11Q96JI7 2443 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 BRCA2P51587 3418 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 WIZO95785 1651 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 KDM5AP29375 1690 aaKnown RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 USP54Q70EL1 1684 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 RYR3Q15413 4870 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CENPFP49454 3210 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 ABCA8O94911 1581 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CFAP54Q96N23 3096 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 MAGI3Q5TCQ9 1506 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 KIAA0586Q9BVV6 1533 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 BPTFQ12830 3046 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 KALRNO60229 2985 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 FANCAO15360 1455 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CFTRP13569 1480 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 WDR7Q9Y4E6 1490 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SETD2Q9BYW2 2564 aaPredicted RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 LOC101927531A0A1B0GV80 90 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 TMEM30CPA0ZSE6 113 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 TMEM189A5PLL7 270 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 PRORSD1PA6NEY8 169 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 J3KT08 172 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 K7EIL1 84 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 TFF1P04155 84 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 TCRAP04437 139 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SLC25A5P05141 298 aaKnown RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 SDC4P31431 198 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 ETV6P41212 452 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SRP9P49458 86 aaKnown RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 DNAJB13P59910 316 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 ZNF56Q15929 161 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 IZUMO2Q6UXV1 221 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 C10orf111Q8N326 155 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 OR5A2Q8NGI9 324 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 OTOSQ8NHW6 89 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SKA2Q8WVK7 121 aaPredicted RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 LINC00208Q96KT6 92 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 DDA1Q9BW61 102 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CALML5Q9NZT1 146 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 ANKHD1Q8IWZ3 2542 aaKnown RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 CEP290O15078 2479 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SPTAN1Q13813 2472 aaKnown RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 CCDC168Q8NDH2 2452 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CELSR3Q9NYQ7 3312 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 TRPM7Q96QT4 1865 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CFAP46Q8IYW2 2715 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 CASZ1Q86V15 1759 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 NUP188Q5SRE5 1749 aa0.5□□□□□ -2.33
CUL3-214ENST00000541548 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.5□□□□□ -2.33
CUL3-214ENST00000541548 TLN1Q9Y490 2541 aaKnown RBP0.49□□□□□ -2.33
CUL3-214ENST00000541548 DCHS1Q96JQ0 3298 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 MAST1Q9Y2H9 1570 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 TULP4Q9NRJ4 1543 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 RYR1P21817 5038 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 EEA1Q15075 1411 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 TRAV17A0A0B4J275 112 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 IGHV1-24A0A0C4DH33 117 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 FXYD1O00168 92 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 IGHV3-30P01768 117 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 GYPBP06028 91 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 IGHV3-30-5P0DP03 117 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 RPL22P35268 128 aaKnown RBP0.49□□□□□ -2.33
CUL3-214ENST00000541548 CAV3P56539 151 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 LSM3P62310 102 aaKnown RBP0.49□□□□□ -2.33
CUL3-214ENST00000541548 XAF1Q6GPH4 301 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 TOMM20LQ6UXN7 152 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 C10orf95Q9H7T3 257 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 PCNX1Q96RV3 2341 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 CTTNBP2Q8WZ74 1663 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 LAMA3Q16787 3333 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 PREX2Q70Z35 1606 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
CUL3-214ENST00000541548 ZMYM4Q5VZL5 1548 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 MAGI1Q96QZ7 1491 aaPredicted RBP0.48□□□□□ -2.33
CUL3-214ENST00000541548 NRXN1Q9ULB1 1477 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 PTPRGP23470 1445 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 HYDINQ4G0P3 5121 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 KIAA1549LQ6ZVL6 1849 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 C5orf42Q9H799 3197 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 LOC285556D6RIA3 1793 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 RBBP6Q7Z6E9 1792 aaKnown RBP0.48□□□□□ -2.33
CUL3-214ENST00000541548 TNS1Q9HBL0 1735 aaKnown RBP0.48□□□□□ -2.33
CUL3-214ENST00000541548 IFITM5A6NNB3 132 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 TPST1O60507 370 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 PAEPP09466 180 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 CCL4P13236 92 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 CMPK1P30085 196 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 PSPHP78330 225 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 FXYD3Q14802 87 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 HSD17B12Q53GQ0 312 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 GLYATL3Q5SZD4 288 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 LYPD5Q6UWN5 251 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 IDO2Q6ZQW0 420 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 OR8I2Q8N0Y5 310 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 NAT14Q8WUY8 206 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms