RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FOXI2Q6ZQN5 318 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 APOMO95445 188 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 PRR25Q96S07 402 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 YAE1D1Q9NRH1 226 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 PRAC2D3DTV9 90 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 CLEC3BP05452 202 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 SPRY2O43597 315 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 CFHR4Q92496 578 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 RNF183Q96D59 192 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 SMPXQ9UHP9 88 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 CYSLTR1Q9Y271 337 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 C15orf32Q32M92 178 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 LRRC75A-AS1Q8N1F1 130 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 NOTCH3Q9UM47 2321 aa11□□□□□ -0.65
SFSWAP-210ENST00000541286 G3V318 75 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 CLEC19AQ6UXS0 136 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 CEND1Q8N111 149 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 FBN1P35555 2871 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 NPFFO15130 113 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 DSCR9P59020 149 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 Q6ZS46 218 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 VWFP04275 2813 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 STAB1Q9NY15 2570 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 CTSGP08311 255 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
SFSWAP-210ENST00000541286 H3BVH4 76 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 RNF5Q99942 180 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 ODF3BA8MYP8 253 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 M0R1W7 72 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 COL6A5A8TX70 2615 aa10.98□□□□□ -0.65
SFSWAP-210ENST00000541286 LY6G6DO95868 133 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 PSMB2P49721 201 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 Q6AWC8 147 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 TMEM158Q8WZ71 300 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 IGKCP01834 107 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 FHL3Q13643 280 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 OR11H6Q8NGC7 330 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 F8W1H4 67 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 IGHV4-59P01825 116 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 ODF1Q14990 250 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 ZFP2Q6ZN57 461 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 Q6ZQT7 251 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 ZNF48Q96MX3 618 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
SFSWAP-210ENST00000541286 TRRAPQ9Y4A5 3859 aa10.96□□□□□ -0.65
SFSWAP-210ENST00000541286 E9PLD3 99 aa10.96□□□□□ -0.66
SFSWAP-210ENST00000541286 MRAP2Q96G30 205 aa10.96□□□□□ -0.66
SFSWAP-210ENST00000541286 INAFM1C9JVW0 142 aa10.96□□□□□ -0.66
SFSWAP-210ENST00000541286 UBE2E1P51965 193 aa10.96□□□□□ -0.66
SFSWAP-210ENST00000541286 KIR2DL4Q99706 377 aa10.96□□□□□ -0.66
SFSWAP-210ENST00000541286 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 A0A1B0GW15 77 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 B5MCH6 92 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 H3BUX3 64 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 XGP55808 180 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 RPL11P62913 178 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 PDE6HQ13956 83 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 SIVA1O15304 175 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 NPBQ8NG41 125 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 SPATA25Q9BR10 227 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
SFSWAP-210ENST00000541286 FABP5P3A8MUU1 101 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 ATP6V0E1O15342 81 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 SORL1Q92673 2214 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 DEFB1P60022 68 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
SFSWAP-210ENST00000541286 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 TRBV20-1A0A075B6N2 111 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 BLCAPP62952 87 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 C1orf122Q6ZSJ8 110 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
SFSWAP-210ENST00000541286 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
SFSWAP-210ENST00000541286 EMP1P54849 157 aa10.92□□□□□ -0.66
SFSWAP-210ENST00000541286 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
SFSWAP-210ENST00000541286 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
SFSWAP-210ENST00000541286 TRGV3P03979 118 aa10.92□□□□□ -0.66
SFSWAP-210ENST00000541286 FOXI1Q12951 378 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms