RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 M0R381 172 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 HIVEP3Q5T1R4 2406 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 IGF1P05019 195 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 LY6DQ14210 128 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 PRR9Q5T870 116 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 ACACBO00763 2458 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 PRTN3P24158 256 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 PRORYQ9H606 182 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
AC005840.4-201ENST00000541242 A8MWV9 139 aa11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 CFC1BP0CG36 223 aa11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 CFC1P0CG37 223 aa11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
AC005840.4-201ENST00000541242 BUB3O43684 328 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 SCGB1C2P0DMR2 95 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 ORMDL2Q53FV1 153 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 C11orf71Q6IPW1 123 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 NPBQ8NG41 125 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 DPM3Q9P2X0 92 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 TRAV8-2A0A0B4J237 113 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 A0A0J9YY99 117 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 CRYGDP07320 174 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 MGPP08493 103 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 GAGE5Q13069 117 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 GAGE6Q13070 117 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
AC005840.4-201ENST00000541242 RNF223E7ERA6 249 aa11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
AC005840.4-201ENST00000541242 TRBV20-1A0A075B6N2 111 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 RBAKDNA6NC62 111 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 H7C2G1 150 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 CLEC3BP05452 202 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 DEFB1P60022 68 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 HERV-K104P63124 156 aa11.27□□□□□ -0.61
AC005840.4-201ENST00000541242 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 CRLF1O75462 422 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 SBSPONQ8IVN8 264 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 MUC4Q99102 2169 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 IGLV4-69A0A075B6H9 119 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 C9JAW5 83 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 IGHV3-30P01768 117 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 IGHV3-30-5P0DP03 117 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 CITED1Q99966 193 aa11.26□□□□□ -0.61
AC005840.4-201ENST00000541242 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 TSHBP01222 138 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 AKAP6Q13023 2319 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 SLC25A20O43772 301 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 LYRM7Q5U5X0 104 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
AC005840.4-201ENST00000541242 ECSCRQ19T08 205 aa11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 CCDC179H3BU77 68 aa11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 ARL3P36405 182 aa11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
AC005840.4-201ENST00000541242 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
AC005840.4-201ENST00000541242 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
AC005840.4-201ENST00000541242 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
AC005840.4-201ENST00000541242 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
AC005840.4-201ENST00000541242 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
AC005840.4-201ENST00000541242 ELANEP08246 267 aa11.22□□□□□ -0.61
AC005840.4-201ENST00000541242 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
AC005840.4-201ENST00000541242 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
AC005840.4-201ENST00000541242 ZFP36P26651 326 aaKnown RBP11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 C20orf173Q96LM9 149 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 ODF3BA8MYP8 253 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 SCGB2A1O75556 95 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 SMIM20Q8N5G0 67 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 NTN5Q8WTR8 489 aaPredicted RBP11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 VCX2Q9H322 139 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 PHLDA3Q9Y5J5 127 aa11.21□□□□□ -0.61
AC005840.4-201ENST00000541242 A4D1N5 150 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 RHODO00212 210 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 SRD5A1P18405 259 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 NDUFV3P56181 108 aaKnown RBP11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms