RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 C20orf144Q9BQM9 153 aa10.46□□□□□ -0.74
CYB561A3-216ENST00000540755 G3V4G9 280 aa10.45□□□□□ -0.74
CYB561A3-216ENST00000540755 ASIPP42127 132 aa10.45□□□□□ -0.74
CYB561A3-216ENST00000540755 GTSCR1Q86UQ5 136 aa10.45□□□□□ -0.74
CYB561A3-216ENST00000540755 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
CYB561A3-216ENST00000540755 IGLL1P15814 213 aa10.44□□□□□ -0.74
CYB561A3-216ENST00000540755 NUTF2P61970 127 aaKnown RBP10.44□□□□□ -0.74
CYB561A3-216ENST00000540755 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
CYB561A3-216ENST00000540755 WFDC10AQ9H1F0 79 aa10.44□□□□□ -0.74
CYB561A3-216ENST00000540755 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 H3BVH4 76 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 GNRH2O43555 120 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 INSP01308 110 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 S100A4P26447 101 aaKnown RBP10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 CACNG7P62955 275 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 ZNF493Q6ZR52 646 aa10.43□□□□□ -0.74
CYB561A3-216ENST00000540755 NTF3P20783 257 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 HIST1H2BLQ99880 126 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 DNAH3Q8TD57 4116 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 SLAQ13239 276 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 TWIST1Q15672 202 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 MORN3Q6PF18 240 aaPredicted RBP10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 OR10AG1Q8NH19 301 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 LINC00467Q9BRT7 94 aa10.42□□□□□ -0.74
CYB561A3-216ENST00000540755 TRGV11A0A075B6L2 103 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 IFITM10A6NMD0 228 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 C12orf57Q99622 126 aa10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
CYB561A3-216ENST00000540755 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 FABP4P15090 132 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 SRIP30626 198 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 SPANXN1Q5VSR9 72 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 Q8N1Y9 231 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 TMEM256Q8N2U0 113 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 OR10D4PQ8NGN7 298 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 XCL2Q9UBD3 114 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
CYB561A3-216ENST00000540755 LOC102724200A0A096LPH7 203 aaPredicted RBP10.39□□□□□ -0.75
CYB561A3-216ENST00000540755 C1QTNF4Q9BXJ3 329 aa10.39□□□□□ -0.75
CYB561A3-216ENST00000540755 TMEM191AQ9H0A3 160 aa10.39□□□□□ -0.75
CYB561A3-216ENST00000540755 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
CYB561A3-216ENST00000540755 CBY3A6NI87 242 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 NXPH4O95158 308 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 RPL35AP18077 110 aaKnown RBP10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 SSTP61278 116 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 KIAA1644Q3SXP7 199 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 LINC01587Q99440 93 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 TIMM8BQ9Y5J9 83 aaPredicted RBP10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 MUC4Q99102 2169 aa10.38□□□□□ -0.75
CYB561A3-216ENST00000540755 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
CYB561A3-216ENST00000540755 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
CYB561A3-216ENST00000540755 C1orf158Q8N1D5 194 aa10.37□□□□□ -0.75
CYB561A3-216ENST00000540755 C18orf32Q8TCD1 76 aa10.37□□□□□ -0.75
CYB561A3-216ENST00000540755 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
CYB561A3-216ENST00000540755 PPBPP02775 128 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 RAB4AP20338 218 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 PMCHP20382 165 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 SMIM15Q7Z3B0 74 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 CHCHD1Q96BP2 118 aaKnown RBP10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 M0R381 172 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 SERF1AO75920 110 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 JOSD1Q15040 202 aaPredicted RBP10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
CYB561A3-216ENST00000540755 S100A12P80511 92 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 EGFEM1PQ0D2K5 195 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 U3KQK5 164 aa10.35□□□□□ -0.75
CYB561A3-216ENST00000540755 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 SPRY2O43597 315 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 HTN1P15515 57 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 EVI2AP22794 236 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 RNF185Q96GF1 192 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 SAMD10Q9BYL1 202 aa10.34□□□□□ -0.75
CYB561A3-216ENST00000540755 NBEAL2Q6ZNJ1 2754 aa10.33□□□□□ -0.76
CYB561A3-216ENST00000540755 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
CYB561A3-216ENST00000540755 PYY3Q5JQD4 70 aa10.33□□□□□ -0.76
CYB561A3-216ENST00000540755 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
CYB561A3-216ENST00000540755 PTH2Q96A98 100 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms