RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HOXA3O43365 443 aaPredicted RBP7.31□□□□□ -1.24
CDH13-204ENST00000539548 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
CDH13-204ENST00000539548 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
CDH13-204ENST00000539548 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
CDH13-204ENST00000539548 IGSF10Q6WRI0 2623 aa7.31□□□□□ -1.24
CDH13-204ENST00000539548 HRNRQ86YZ3 2850 aaPredicted RBP7.31□□□□□ -1.24
CDH13-204ENST00000539548 SPRY2O43597 315 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 RPL32P62910 135 aaKnown RBP7.3□□□□□ -1.24
CDH13-204ENST00000539548 SAMD13Q5VXD3 122 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 UNQ9165/PRO28630Q6UXU0 137 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 TMEM219Q86XT9 240 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 NXPH4O95158 308 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 BRI3O95415 125 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 MGPP08493 103 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 RNASE4P34096 147 aaKnown RBP7.3□□□□□ -1.24
CDH13-204ENST00000539548 MORN3Q6PF18 240 aaPredicted RBP7.3□□□□□ -1.24
CDH13-204ENST00000539548 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 LINC00527Q9UJ94 153 aa7.3□□□□□ -1.24
CDH13-204ENST00000539548 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 A0A087WW49 117 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 GNRH2O43555 120 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 TRBV12-3P01733 135 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 RNASE3P12724 160 aaKnown RBP7.29□□□□□ -1.24
CDH13-204ENST00000539548 AZU1P20160 251 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 AMTNQ6UX39 209 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 SPAG8Q99932 426 aaPredicted RBP7.29□□□□□ -1.24
CDH13-204ENST00000539548 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 IGHV1-69DA0A0B4J2H0 117 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 COX6B1P14854 86 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 LINC00315P59091 139 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 ETDBQ3ZM63 59 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 USMG5Q96IX5 58 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 BPESC1Q9GZL8 116 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 UBTD1Q9HAC8 227 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 TSSC4Q9Y5U2 329 aaPredicted RBP7.29□□□□□ -1.24
CDH13-204ENST00000539548 MED13LQ71F56 2210 aa7.29□□□□□ -1.24
CDH13-204ENST00000539548 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 A6NJY4 79 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 ZNF815PA8K554 130 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 CRYGDP07320 174 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 UCNP55089 124 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 DEFB1P60022 68 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 SPATA25Q9BR10 227 aa7.28□□□□□ -1.24
CDH13-204ENST00000539548 H3BUA1 57 aa7.27□□□□□ -1.24
CDH13-204ENST00000539548 UBE2D1P51668 147 aa7.27□□□□□ -1.24
CDH13-204ENST00000539548 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.24
CDH13-204ENST00000539548 IGIPA6NJ69 53 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 DUSP14O95147 198 aaKnown RBP7.27□□□□□ -1.25
CDH13-204ENST00000539548 TSHBP01222 138 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 IGHV1-69P01742 117 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 POLR2KP53803 58 aaKnown RBP7.27□□□□□ -1.25
CDH13-204ENST00000539548 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 MUC4Q99102 2169 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 CSMD1Q96PZ7 3565 aa7.27□□□□□ -1.25
CDH13-204ENST00000539548 IGLV4-69A0A075B6H9 119 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 F6UB75 175 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 RPL11P62913 178 aaKnown RBP7.26□□□□□ -1.25
CDH13-204ENST00000539548 SRSF9Q13242 221 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDH13-204ENST00000539548 SCGB1D4Q6XE38 83 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
CDH13-204ENST00000539548 C11orf86A6NJI1 115 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 KLLNB2CW77 178 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 IGHG2P01859 326 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 HERVK_113P61574 105 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 PMVKQ15126 192 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 ZFP2Q6ZN57 461 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 BBC3Q96PG8 261 aaPredicted RBP7.26□□□□□ -1.25
CDH13-204ENST00000539548 RHPN1-AS1Q9BWJ2 59 aa7.26□□□□□ -1.25
CDH13-204ENST00000539548 MRPL16Q9NX20 251 aaKnown RBP7.26□□□□□ -1.25
CDH13-204ENST00000539548 MAST4O15021 2626 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 IGHV3OR16-10A0A075B7F0 116 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 VCYO14598 125 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 CD7P09564 240 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 KLHL30-AS1Q8NEE0 82 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 ATP6V0E2Q8NHE4 81 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 DLX4Q92988 240 aaPredicted RBP7.25□□□□□ -1.25
CDH13-204ENST00000539548 NDUFS8O00217 210 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 CIDEAO60543 219 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 IGHV3-11P01762 117 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 SMAGPQ0VAQ4 97 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 CFAP126Q5VTH2 177 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 TP53TG1Q9Y2A0 90 aa7.25□□□□□ -1.25
CDH13-204ENST00000539548 A0A0J9YY99 117 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 TSPAN13O95857 204 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 UBE2D3P61077 147 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 UBE2D2P62837 147 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 SUMO4Q6EEV6 95 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 FAM159AQ6UWV7 190 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 BRD3OSQ6XYD6 125 aa7.24□□□□□ -1.25
CDH13-204ENST00000539548 MTURNQ8N3F0 131 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms