RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 OR10AG1Q8NH19 301 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
CD4-208ENST00000538827 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
CD4-208ENST00000538827 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
CD4-208ENST00000538827 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 M0R381 172 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 SNAI2O43623 268 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 RIGQ13278 110 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 DNLZQ5SXM8 178 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 Q6ZWC4 215 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
CD4-208ENST00000538827 COL7A1Q02388 2944 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 F2Z2F3 143 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 OR5AL1P0C617 328 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 CAMPP49913 170 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 EMP1P54849 157 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 RAB4BP61018 213 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 CACNG7P62955 275 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 TWIST1Q15672 202 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 RNASE8Q8TDE3 154 aaKnown RBP10.21□□□□□ -0.77
CD4-208ENST00000538827 RNF183Q96D59 192 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 FAM210BQ96KR6 192 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 YPEL4Q96NS1 127 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 X6R8D5 127 aa10.21□□□□□ -0.77
CD4-208ENST00000538827 HBBP68871 147 aa10.2□□□□□ -0.78
CD4-208ENST00000538827 ZFP82Q8N141 532 aa10.2□□□□□ -0.78
CD4-208ENST00000538827 C11orf72Q8NBR9 251 aa10.2□□□□□ -0.78
CD4-208ENST00000538827 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
CD4-208ENST00000538827 MRPL16Q9NX20 251 aaKnown RBP10.2□□□□□ -0.78
CD4-208ENST00000538827 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
CD4-208ENST00000538827 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
CD4-208ENST00000538827 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
CD4-208ENST00000538827 SSBP4Q9BWG4 385 aaPredicted RBP10.19□□□□□ -0.78
CD4-208ENST00000538827 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
CD4-208ENST00000538827 MUC4Q99102 2169 aa10.19□□□□□ -0.78
CD4-208ENST00000538827 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 S100A8P05109 93 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 NTF3P20783 257 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 ZNF493Q6ZR52 646 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 SBSPONQ8IVN8 264 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 OVOL2Q9BRP0 275 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 SPXQ9BT56 116 aa10.18□□□□□ -0.78
CD4-208ENST00000538827 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 A0A1B0GXF2 115 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 COLCA2A8K830 154 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 M0R2P5 195 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 DEFB4AO15263 64 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 MIFP14174 115 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 RPS10P46783 165 aaKnown RBP10.17□□□□□ -0.78
CD4-208ENST00000538827 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 NOP10Q9NPE3 64 aaKnown RBP10.17□□□□□ -0.78
CD4-208ENST00000538827 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 TP53TG1Q9Y2A0 90 aa10.17□□□□□ -0.78
CD4-208ENST00000538827 A0A1B0GW15 77 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 NXPH4O95158 308 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 RAB5AP20339 215 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 ZNF876PQ49A33 203 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
CD4-208ENST00000538827 MGPP08493 103 aa10.15□□□□□ -0.78
CD4-208ENST00000538827 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
CD4-208ENST00000538827 Q8NAQ8 132 aa10.15□□□□□ -0.78
CD4-208ENST00000538827 FRZBQ92765 325 aa10.15□□□□□ -0.78
CD4-208ENST00000538827 IGHV4-4A0A075B6R2 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 GAGE12BA1L429 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 GAGE7O76087 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 COX19Q49B96 90 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 FAM74A4Q5TZK3 123 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 Q6ZTI0 123 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 JPT2Q9H910 190 aa10.14□□□□□ -0.79
CD4-208ENST00000538827 A0A087WWL8 130 aa10.13□□□□□ -0.79
CD4-208ENST00000538827 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
CD4-208ENST00000538827 DAZ2Q13117 558 aaKnown RBP10.13□□□□□ -0.79
CD4-208ENST00000538827 C14orf178Q8N769 122 aaPredicted RBP10.13□□□□□ -0.79
CD4-208ENST00000538827 TM2D3Q9BRN9 247 aa10.13□□□□□ -0.79
CD4-208ENST00000538827 MRPL18Q9H0U6 180 aaKnown RBP10.13□□□□□ -0.79
CD4-208ENST00000538827 ZMAT4Q9H898 229 aa10.13□□□□□ -0.79
CD4-208ENST00000538827 TRAPPC1Q9Y5R8 145 aa10.13□□□□□ -0.79
CD4-208ENST00000538827 RYR2Q92736 4967 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms