RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PLEKHB2Q96CS7 222 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 H3BT86 120 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 C19orf84I3L1E1 186 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 DYSFO75923 2080 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 FREM1Q5H8C1 2179 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 C3orf36Q3SXR2 165 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 COX7CP15954 63 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 CRIP1P50238 77 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 FAM216BQ8N7L0 139 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 M0R3E3 92 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 IGKV3-15P01624 115 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 CRIP2P52943 208 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 HCP5Q6MZN7 132 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 CD177Q8N6Q3 437 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 KIR2DL5BQ8NHK3 375 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 RNF185Q96GF1 192 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 KLK15Q9H2R5 256 aa8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-207ENST00000537408 WNK2Q9Y3S1 2297 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 E7EQL1 145 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 TMEM258P61165 79 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 TEX36Q5VZQ5 186 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 COL6A3P12111 3177 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 F8WDY8 70 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 LGALS3P17931 250 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 DUX4L9Q6RFH8 374 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 SEM1Q6ZVN7 128 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 PRR25Q96S07 402 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 DLX6P56179 175 aa8.42□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV1-46P01743 117 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 IGKV1-16P04430 117 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 DLX1P56177 255 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 A0A0J9YY99 117 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 ATOX1O00244 68 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 TMEM30BQ3MIR4 351 aa8.41□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 WT1-ASQ06250 92 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 DTX2Q86UW9 622 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 A0A0B4J2C4 111 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 LYNX1G3V0Z9 82 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 LYNX1P0DP58 116 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
CLSTN3-207ENST00000537408 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.07
CLSTN3-207ENST00000537408 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.07
CLSTN3-207ENST00000537408 CRYGAP11844 174 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 EBI3Q14213 229 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 REV3LO60673 3130 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 PCSK5Q92824 1860 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 EGR2P11161 476 aaPredicted RBP8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 IL17RELQ6ZVW7 336 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 KLHL30-AS1Q8NEE0 82 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
CLSTN3-207ENST00000537408 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 MSRB1Q9NZV6 116 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 SRRM5B3KS81 715 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 C10orf55Q5SWW7 151 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 BPESC1Q9GZL8 116 aa8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 HELZ2Q9BYK8 2649 aaKnown RBP8.38□□□□□ -1.07
CLSTN3-207ENST00000537408 SRSF2Q01130 221 aaKnown RBP8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 METTL26Q96S19 204 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 IGLV2-18A0A075B6J9 118 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 PDE6HQ13956 83 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 TOMM6Q96B49 74 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 RPUSD1Q9UJJ7 312 aaKnown RBP8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
CLSTN3-207ENST00000537408 VCANP13611 3396 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 PRR14LQ5THK1 2151 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 OVOL1O14753 267 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 CXCL5P42830 114 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 GAS8-AS1O95177 125 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 C17orf58Q2M2W7 97 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 TMEM263Q8WUH6 116 aaKnown RBP8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 IGKV1D-17A0A075B6S4 117 aa8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
CLSTN3-207ENST00000537408 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 CCL3L1P16619 93 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms