RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 DEFB1P60022 68 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 DCANP1Q8TF63 244 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 VAMP8Q9BV40 100 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 GPX1P07203 203 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 COTL1Q14019 142 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 ZNF493Q6ZR52 646 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
CLIP1-208ENST00000537004 MUC21A0A0G2JKD1 596 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 MUC21A0A140T8X8 626 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 IGLV1-51P01701 117 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 CSN3P07498 182 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 ID1P41134 155 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 AMTP48728 403 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 Q6ZWC4 215 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 OR8A1Q8NGG7 326 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 F6UB75 175 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-208ENST00000537004 PMCHP20382 165 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 PRR9Q5T870 116 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 ADAMTSL5Q6ZMM2 481 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
CLIP1-208ENST00000537004 Q6ZQT7 251 aa8.86□□□□□ -0.99
CLIP1-208ENST00000537004 WFDC3Q8IUB2 231 aa8.86□□□□□ -0.99
CLIP1-208ENST00000537004 ZFAND2AQ8N6M9 145 aa8.86□□□□□ -0.99
CLIP1-208ENST00000537004 B9D2Q9BPU9 175 aa8.86□□□□□ -0.99
CLIP1-208ENST00000537004 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 NTF3P20783 257 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 TWIST1Q15672 202 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 TDRG1Q3Y452 100 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 RNASEKQ6P5S7 137 aaKnown RBP8.85□□□□□ -0.99
CLIP1-208ENST00000537004 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 ORAOV1Q8WV07 137 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 PAM16Q9Y3D7 125 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 C20orf202A1L168 122 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 J3KRW8 73 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 BATFQ16520 125 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 NIT1Q86X76 327 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
CLIP1-208ENST00000537004 HSBP1O75506 76 aa8.84□□□□□ -0.99
CLIP1-208ENST00000537004 TFPI2P48307 235 aa8.84□□□□□ -0.99
CLIP1-208ENST00000537004 RBX1P62877 108 aa8.84□□□□□ -0.99
CLIP1-208ENST00000537004 URB1-AS1Q96HZ7 61 aa8.84□□□□□ -0.99
CLIP1-208ENST00000537004 TRBV7-9A0A0J9YWB2 115 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 K7EP13 123 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 CDKN1BP46527 198 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 FAM104BQ5XKR9 115 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 AMN1Q8IY45 258 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
CLIP1-208ENST00000537004 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 K7EQG2 157 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 ZNF688P0C7X2 276 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 SNRPD3P62318 126 aaKnown RBP8.83□□□□□ -1
CLIP1-208ENST00000537004 CD300EQ496F6 205 aaPredicted RBP8.83□□□□□ -1
CLIP1-208ENST00000537004 Q8N1Y9 231 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 PEMTQ9UBM1 199 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
CLIP1-208ENST00000537004 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
CLIP1-208ENST00000537004 PSMG4Q5JS54 123 aa8.82□□□□□ -1
CLIP1-208ENST00000537004 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
CLIP1-208ENST00000537004 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
CLIP1-208ENST00000537004 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
CLIP1-208ENST00000537004 TMEM191AQ9H0A3 160 aa8.82□□□□□ -1
CLIP1-208ENST00000537004 D6R8Y8 96 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 M0R2Z0 102 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 PTTG1IPP53801 180 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 KRTDAPP60985 99 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
CLIP1-208ENST00000537004 SIGLEC8Q9NYZ4 499 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 U3KQK5 164 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 MUC4Q99102 2169 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 OR5AL1P0C617 328 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 KIR3DS1Q14943 382 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 OR10AG1Q8NH19 301 aa8.81□□□□□ -1
CLIP1-208ENST00000537004 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
CLIP1-208ENST00000537004 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
CLIP1-208ENST00000537004 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 UBE2V1Q13404 147 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 DEFB114Q30KQ6 69 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 ORMDL3Q8N138 153 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 DYNLRB2Q8TF09 96 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 LAMTOR2Q9Y2Q5 125 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 A0A0J9YX75 114 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 KLLNB2CW77 178 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 H3BVH4 76 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 CCL25O15444 150 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 SNAI2O43623 268 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 PMCHL1Q16048 86 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 SPATA45Q537H7 98 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 STPG4Q8N801 248 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 Q8N976 141 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 PRELID3AQ96N28 172 aa8.8□□□□□ -1
CLIP1-208ENST00000537004 IGHV1-24A0A0C4DH33 117 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms