RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 G3V318 75 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 ZNF688P0C7X2 276 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-203ENST00000535977 LINC01559Q495D7 138 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 ARL17AQ8IVW1 177 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 Q8TAT8 98 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 ORM1P02763 201 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 U3KQE9 123 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 HLA-DMBP28068 263 aa13.71□□□□□ -0.21
RAB40C-203ENST00000535977 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
RAB40C-203ENST00000535977 LINC01549A6NIU2 74 aa13.71□□□□□ -0.21
RAB40C-203ENST00000535977 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
RAB40C-203ENST00000535977 PIMREGQ9BSJ6 248 aa13.71□□□□□ -0.21
RAB40C-203ENST00000535977 LRBAP50851 2863 aa13.71□□□□□ -0.22
RAB40C-203ENST00000535977 TRAV41A0A0B4J266 112 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 IGHV4-39P01824 125 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GNLYP22749 145 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 RNF185Q96GF1 192 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 VCX2Q9H322 139 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 FLNCQ14315 2725 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 TRBV20-1A0A075B6N2 111 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE12JA6NER3 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 C19orf84I3L1E1 186 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE7O76087 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE12FP0CL80 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE12GP0CL81 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE12IP0CL82 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE4Q13068 117 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
RAB40C-203ENST00000535977 RHODO00212 210 aa13.69□□□□□ -0.22
RAB40C-203ENST00000535977 SRD5A1P18405 259 aa13.69□□□□□ -0.22
RAB40C-203ENST00000535977 NDUFV3P56181 108 aaKnown RBP13.69□□□□□ -0.22
RAB40C-203ENST00000535977 HIVEP3Q5T1R4 2406 aa13.69□□□□□ -0.22
RAB40C-203ENST00000535977 SPTBN1Q01082 2364 aaKnown RBP13.69□□□□□ -0.22
RAB40C-203ENST00000535977 TNFRSF6BO95407 300 aa13.69□□□□□ -0.22
RAB40C-203ENST00000535977 TMEM78Q5T7P6 136 aa13.69□□□□□ -0.22
RAB40C-203ENST00000535977 NXT2Q9NPJ8 142 aaKnown RBP13.69□□□□□ -0.22
RAB40C-203ENST00000535977 HRNRQ86YZ3 2850 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-203ENST00000535977 LINC01619G3V211 115 aa13.68□□□□□ -0.22
RAB40C-203ENST00000535977 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-203ENST00000535977 ERCC8Q13216 396 aa13.68□□□□□ -0.22
RAB40C-203ENST00000535977 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
RAB40C-203ENST00000535977 ZNF575Q86XF7 245 aa13.68□□□□□ -0.22
RAB40C-203ENST00000535977 SPTAN1Q13813 2472 aaKnown RBP13.68□□□□□ -0.22
RAB40C-203ENST00000535977 H3BUA1 57 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 C9orf47Q6ZRZ4 202 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 TNFRSF18Q9Y5U5 241 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 PRAC2D3DTV9 90 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 AGPAT4-IT1Q9H0P7 198 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 LENEPQ9Y5L5 61 aa13.67□□□□□ -0.22
RAB40C-203ENST00000535977 DCHS2Q6V1P9 2916 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 UBE2D3P61077 147 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 UBE2D2P62837 147 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 ANKRD29Q8N6D5 301 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 PSMG3-AS1Q96PY0 264 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 A0A087WX48 190 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 H3BVH4 76 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 IGF1P05019 195 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 RNF182Q8N6D2 247 aa13.66□□□□□ -0.22
RAB40C-203ENST00000535977 TACC2O95359 2948 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 TRAV8-2A0A0B4J237 113 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE2BQ13066 116 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE2EQ4V326 116 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 IL17RELQ6ZVW7 336 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 USMG5Q96IX5 58 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 GAGE2DQ9UEU5 116 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 A8MWV9 139 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 TCL1BO95988 128 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 TRGV3P03979 118 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
RAB40C-203ENST00000535977 TMEM219Q86XT9 240 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 C10orf105Q8TEF2 133 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 RAX2Q96IS3 184 aa13.65□□□□□ -0.22
RAB40C-203ENST00000535977 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
RAB40C-203ENST00000535977 MYOZ3Q8TDC0 251 aa13.64□□□□□ -0.23
RAB40C-203ENST00000535977 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
RAB40C-203ENST00000535977 CCL19Q99731 98 aa13.64□□□□□ -0.23
RAB40C-203ENST00000535977 TRAV4A0A0B4J268 109 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 NDUFA4O00483 81 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 TGFAP01135 160 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 ARL3P36405 182 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 PLNP26678 52 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 UBE2D1P51668 147 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 Q8N8P6 123 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 CRLF1O75462 422 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 C16orf92Q96LL3 132 aa13.63□□□□□ -0.23
RAB40C-203ENST00000535977 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
RAB40C-203ENST00000535977 IGLV2-18A0A075B6J9 118 aa13.62□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV4-61A0A0C4DH41 118 aa13.62□□□□□ -0.23
RAB40C-203ENST00000535977 IFITM1P13164 125 aa13.62□□□□□ -0.23
RAB40C-203ENST00000535977 TTC32Q5I0X7 151 aa13.62□□□□□ -0.23
RAB40C-203ENST00000535977 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 SNCGO76070 127 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 IGHG2P01859 326 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms