RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 MORN4Q8NDC4 146 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 FAM57AQ8TBR7 257 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 C16orf74Q96GX8 76 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 TP73-AS1Q9UF72 201 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 ANAPC10Q9UM13 185 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 KLK5Q9Y337 293 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 TET2Q6N021 2002 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 OTOGQ6ZRI0 2925 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 DOCK6Q96HP0 2047 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 C2orf16Q68DN1 1984 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 NDUFB2O95178 105 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 SLC25A14O95258 325 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 GYPBP06028 91 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 COX6A1P12074 109 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 SYNJ2BPP57105 145 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 LYZP61626 148 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 NPC2P61916 151 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 RPL30P62888 115 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 FAM78AQ5JUQ0 283 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 C9orf129Q5T035 196 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 TRAPPC6BQ86SZ2 158 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PRR15Q8IV56 129 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 OR5AS1Q8N127 324 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00311Q8N616 119 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 DRAM1Q8N682 238 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 LINC01600Q96MT4 127 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 C18orf15Q96N68 181 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 MGST2Q99735 147 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PLA2G12AQ9BZM1 189 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PDFQ9HBH1 243 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 ZNF286AQ9HBT8 521 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 RPUSD1Q9UJJ7 312 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 KIF25-AS1Q9Y6Z4 181 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 NUP210Q8TEM1 1887 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 NAV3Q8IVL0 2385 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 IGKV6D-41A0A0C4DH26 115 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 IZUMO1RA6ND01 250 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 CXCL5P42830 114 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 SSR2P43308 183 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 GFERP55789 205 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 RTL8BQ17RB0 113 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 CENPWQ5EE01 88 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 CPAMD8Q8IZJ3 1885 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 ODF3Q96PU9 254 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 PRSS27Q9BQR3 290 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 HDHD3Q9BSH5 251 aaPredicted RBP2.45□□□□□ -2.02
CSMD3-210ENST00000534172 RTL8AQ9BWD3 113 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 NHP2Q9NX24 153 aaKnown RBP2.45□□□□□ -2.02
CSMD3-210ENST00000534172 TIMM9Q9Y5J7 89 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 ANKRD36A6QL64 1941 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 NOTCH2Q04721 2471 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 HIVEP3Q5T1R4 2406 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 TRAV8-3A0A0A6YYJ7 113 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 IGHV6-1A0A0B4J1U7 121 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 UPK2O00526 184 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 CST7O76096 145 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 BGLAPP02818 100 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 FXYD2P54710 66 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 MRPS36P82909 103 aaKnown RBP2.45□□□□□ -2.02
CSMD3-210ENST00000534172 NPBQ8NG41 125 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 KLK6Q92876 244 aa2.45□□□□□ -2.02
CSMD3-210ENST00000534172 RP1L1Q8IWN7 2480 aaPredicted RBP2.45□□□□□ -2.02
CSMD3-210ENST00000534172 CACNA1DQ01668 2161 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TRBV19A0A075B6N1 114 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 PIGBOS1A0A0B4J2F0 54 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 CTXND1A0A1B0GTU2 59 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TCRBV4S1A1TA0A5B7 111 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 PLAC8L1A1L4L8 177 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 PGPA6NDG6 321 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 KNCNA6PVL3 124 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 C9JCJ5 164 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 H3BT86 120 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 K7EM74 188 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 LY6G6DO95868 133 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 IL4P05112 153 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 ACYP1P07311 99 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 COL8A2P25067 703 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 UBE2L3P68036 154 aaKnown RBP2.44□□□□□ -2.02
CSMD3-210ENST00000534172 ADIGQ0VDE8 80 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 LGALS9BQ3B8N2 356 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 FAM222AQ5U5X8 452 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 OR5C1Q8NGR4 320 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TMEM158Q8WZ71 300 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 IGF2BP2-AS1Q96M15 143 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DSCR8Q96T75 97 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 CHAC1Q9BUX1 264 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 C11orf1Q9H5F2 150 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 OTORQ9NRC9 128 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DMXL2Q8TDJ6 3036 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms