RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TRIQKQ629K1 86 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 OR5C1Q8NGR4 320 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 OTORQ9NRC9 128 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 A0A087WWC5 75 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 C14orf177Q52M58 125 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 SH3BGRL3Q9H299 93 aa12.12□□□□□ -0.47
SSRP1-204ENST00000529002 NOL3O60936 208 aaKnown RBP12.11□□□□□ -0.47
SSRP1-204ENST00000529002 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
SSRP1-204ENST00000529002 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
SSRP1-204ENST00000529002 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
SSRP1-204ENST00000529002 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
SSRP1-204ENST00000529002 WDR61Q9GZS3 305 aaKnown RBP12.1□□□□□ -0.47
SSRP1-204ENST00000529002 A0A087WX48 190 aa12.09□□□□□ -0.47
SSRP1-204ENST00000529002 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
SSRP1-204ENST00000529002 LGALSLQ3ZCW2 172 aaPredicted RBP12.09□□□□□ -0.47
SSRP1-204ENST00000529002 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
SSRP1-204ENST00000529002 PTH2Q96A98 100 aa12.09□□□□□ -0.47
SSRP1-204ENST00000529002 MBD2Q9UBB5 411 aa12.09□□□□□ -0.47
SSRP1-204ENST00000529002 TRAV6A0A075B6T7 132 aa12.08□□□□□ -0.48
SSRP1-204ENST00000529002 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
SSRP1-204ENST00000529002 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
SSRP1-204ENST00000529002 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
SSRP1-204ENST00000529002 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
SSRP1-204ENST00000529002 A0A0D9SG52 128 aa12.07□□□□□ -0.48
SSRP1-204ENST00000529002 GCGP01275 180 aa12.07□□□□□ -0.48
SSRP1-204ENST00000529002 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
SSRP1-204ENST00000529002 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
SSRP1-204ENST00000529002 TAAR5O14804 337 aa12.06□□□□□ -0.48
SSRP1-204ENST00000529002 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
SSRP1-204ENST00000529002 Q0VG73 95 aa12.06□□□□□ -0.48
SSRP1-204ENST00000529002 C15orf54Q8N8G6 183 aa12.06□□□□□ -0.48
SSRP1-204ENST00000529002 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
SSRP1-204ENST00000529002 CENPXA8MT69 81 aa12.05□□□□□ -0.48
SSRP1-204ENST00000529002 A8MWV9 139 aa12.05□□□□□ -0.48
SSRP1-204ENST00000529002 ELOBQ15370 118 aa12.05□□□□□ -0.48
SSRP1-204ENST00000529002 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
SSRP1-204ENST00000529002 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 FAM74A1Q5RGS3 127 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 OR10G9Q8NGN4 311 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 OR2G3Q8NGZ4 309 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 KCNIP2Q9NS61 270 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
SSRP1-204ENST00000529002 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 PLA2G10O15496 165 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 NDFIP1Q9BT67 221 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
SSRP1-204ENST00000529002 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
SSRP1-204ENST00000529002 CRPP02741 224 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 TCRBP04435 133 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 TAS2R45P59539 299 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 MPV17L2Q567V2 206 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 PSG8Q9UQ74 426 aa12.02□□□□□ -0.49
SSRP1-204ENST00000529002 A0A087WYN8 130 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 H0YIZ8 118 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 SIX6O95475 246 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 IL7P13232 177 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
SSRP1-204ENST00000529002 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 NUDT15Q9NV35 164 aa12.01□□□□□ -0.49
SSRP1-204ENST00000529002 LPAP08519 4548 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 A0A087WWL8 130 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 PHOX2AO14813 284 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
SSRP1-204ENST00000529002 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
SSRP1-204ENST00000529002 CNPY1Q3B7I2 92 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 LRRC37A5PQ49AS3 106 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 PRNTQ86SH4 94 aa12□□□□□ -0.49
SSRP1-204ENST00000529002 SMUG1Q53HV7 270 aa11.99□□□□□ -0.49
SSRP1-204ENST00000529002 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
SSRP1-204ENST00000529002 ARL6IP6Q8N6S5 226 aa11.99□□□□□ -0.49
SSRP1-204ENST00000529002 CCDC160A6NGH7 325 aa11.98□□□□□ -0.49
SSRP1-204ENST00000529002 H3BVH4 76 aa11.98□□□□□ -0.49
SSRP1-204ENST00000529002 LYRM1O43325 122 aa11.98□□□□□ -0.49
SSRP1-204ENST00000529002 TCRAP04437 139 aa11.98□□□□□ -0.49
SSRP1-204ENST00000529002 RPL19P84098 196 aaKnown RBP11.98□□□□□ -0.49
SSRP1-204ENST00000529002 HSD17B11Q8NBQ5 300 aa11.98□□□□□ -0.49
SSRP1-204ENST00000529002 UBE2D3P61077 147 aa11.97□□□□□ -0.49
SSRP1-204ENST00000529002 UBE2D2P62837 147 aa11.97□□□□□ -0.49
SSRP1-204ENST00000529002 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
SSRP1-204ENST00000529002 SMIM3Q9BZL3 60 aa11.97□□□□□ -0.49
SSRP1-204ENST00000529002 KIF25-AS1Q9Y6Z4 181 aa11.97□□□□□ -0.49
SSRP1-204ENST00000529002 RAB2AP61019 212 aa11.96□□□□□ -0.49
SSRP1-204ENST00000529002 PIK3CD-AS1Q5SR53 167 aa11.96□□□□□ -0.49
SSRP1-204ENST00000529002 PQLC2Q6ZP29 291 aa11.96□□□□□ -0.49
SSRP1-204ENST00000529002 RHODO00212 210 aa11.95□□□□□ -0.5
SSRP1-204ENST00000529002 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
SSRP1-204ENST00000529002 KRTAP9-2Q9BYQ4 174 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms