RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RGS13O14921 159 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 IFNA1P01562 189 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 TCRAP04437 139 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 BCL2P10415 239 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 GCSHP23434 173 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
CPSF1-201ENST00000526271 GNG5P63218 68 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
CPSF1-201ENST00000526271 GPX1P07203 203 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 RAB14P61106 215 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
CPSF1-201ENST00000526271 CLLU1Q5K131 121 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 TMEM78Q5T7P6 136 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 HIST1H2BAQ96A08 127 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
CPSF1-201ENST00000526271 RBFOX3A6NFN3 312 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 EREGO14944 169 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 WFDC2Q14508 124 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 ZNF506Q5JVG8 444 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 MUC21Q5SSG8 566 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
CPSF1-201ENST00000526271 F6UZH7 168 aa9.53□□□□□ -0.88
CPSF1-201ENST00000526271 PEX7O00628 323 aa9.53□□□□□ -0.88
CPSF1-201ENST00000526271 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
CPSF1-201ENST00000526271 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
CPSF1-201ENST00000526271 GYPEP15421 78 aa9.53□□□□□ -0.88
CPSF1-201ENST00000526271 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-201ENST00000526271 PKHD1L1Q86WI1 4243 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 FBLL1A6NHQ2 334 aaKnown RBP9.52□□□□□ -0.89
CPSF1-201ENST00000526271 K7EQM0 130 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 ZNF138P52744 262 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 RASL10AQ92737 203 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
CPSF1-201ENST00000526271 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 SCO2A0A1W2PP80 73 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 PDE6DO43924 150 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 CRYGDP07320 174 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 SRIP30626 198 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 Q6ZSN1 163 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 TMEM70Q9BUB7 260 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 PSG8Q9UQ74 426 aa9.51□□□□□ -0.89
CPSF1-201ENST00000526271 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 TRGV4A0A0C4DH28 118 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
CPSF1-201ENST00000526271 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
CPSF1-201ENST00000526271 FLI1Q01543 452 aaPredicted RBP9.5□□□□□ -0.89
CPSF1-201ENST00000526271 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 SLAQ13239 276 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 TOR2AQ5JU69 321 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 Q6AWC8 147 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 Q8N3U1 123 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 TVP23CQ96ET8 276 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
CPSF1-201ENST00000526271 SMDT1Q9H4I9 107 aa9.5□□□□□ -0.89
CPSF1-201ENST00000526271 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
CPSF1-201ENST00000526271 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
CPSF1-201ENST00000526271 MED9Q9NWA0 146 aa9.49□□□□□ -0.89
CPSF1-201ENST00000526271 TMEM250H0YL14 139 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 GNRH2O43555 120 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
CPSF1-201ENST00000526271 EVI2AP22794 236 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 AKR1C3P42330 323 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 SRSF3P84103 164 aaKnown RBP9.48□□□□□ -0.89
CPSF1-201ENST00000526271 Q6ZSA8 131 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 Q8N814 137 aa9.48□□□□□ -0.89
CPSF1-201ENST00000526271 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 RAB19A4D1S5 217 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 C9JQL5 133 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 LTAP01374 205 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 UBE2G1P62253 170 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 PEA15Q15121 130 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 ZFP30Q9Y2G7 519 aa9.47□□□□□ -0.89
CPSF1-201ENST00000526271 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-201ENST00000526271 K7EP13 123 aa9.46□□□□□ -0.9
CPSF1-201ENST00000526271 GATA1P15976 413 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-201ENST00000526271 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.9
CPSF1-201ENST00000526271 TIRAPP58753 221 aa9.46□□□□□ -0.9
CPSF1-201ENST00000526271 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
CPSF1-201ENST00000526271 LINC01556Q5JQF7 62 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms