RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 NDUFA11Q86Y39 141 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 ID1P41134 155 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 DGAT2L7PQ6IED9 249 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 SMAD5-AS1Q9Y6J3 95 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 PCSK5Q92824 1860 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 FCN3O75636 299 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 FAM110DQ8TAY7 271 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-212ENST00000523387 A4D1N5 150 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 CFC1P0CG37 223 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 MORN3Q6PF18 240 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-212ENST00000523387 NRACQ8N912 160 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 M0R1W7 72 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 NPBQ8NG41 125 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 C11orf21Q9P2W6 132 aa6.94□□□□□ -1.3
CSMD1-212ENST00000523387 SDHAF1A6NFY7 115 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 H3BMM0 161 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 GNRH2O43555 120 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 UBE2WQ96B02 151 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 CCL21O00585 134 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 TRPT1Q86TN4 253 aaKnown RBP6.93□□□□□ -1.3
CSMD1-212ENST00000523387 TMEM219Q86XT9 240 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 CNFNQ9BYD5 112 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 RAI1Q7Z5J4 1906 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-212ENST00000523387 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 IGHV7-81A0A0B4J1V7 117 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
CSMD1-212ENST00000523387 TRBV7-1A0A0A6YYK4 115 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 OOSP1A8MZH6 123 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 LY6EQ16553 131 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 SPXQ9BT56 116 aa6.93□□□□□ -1.3
CSMD1-212ENST00000523387 TRAV12-3A0A0B4J271 114 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 F6UB75 175 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 M0R2P5 195 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 DEFB1P60022 68 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 MINOS1Q5TGZ0 78 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 RASL10AQ92737 203 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 MINOS1-NBL1R4GNA1 71 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 ADARB2-AS1A8MUL3 147 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 CD28P10747 220 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 PLA2G2CQ5R387 149 aa6.92□□□□□ -1.3
CSMD1-212ENST00000523387 IGFL3Q6UXB1 125 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 Q6ZQT7 251 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 TRAV41A0A0B4J266 112 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 A0A0J9YY99 117 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
CSMD1-212ENST00000523387 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 IGF1P05019 195 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.3
CSMD1-212ENST00000523387 IGHV7-4-1A0A0J9YVY3 117 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 CIRBPQ14011 172 aaKnown RBP6.9□□□□□ -1.3
CSMD1-212ENST00000523387 C9orf47Q6ZRZ4 202 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 TIMM21Q9BVV7 248 aa6.9□□□□□ -1.3
CSMD1-212ENST00000523387 LINC01619G3V211 115 aa6.9□□□□□ -1.31
CSMD1-212ENST00000523387 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.31
CSMD1-212ENST00000523387 DSPP15924 2871 aaKnown RBP6.89□□□□□ -1.31
CSMD1-212ENST00000523387 ZFHX2Q9C0A1 2572 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-212ENST00000523387 NDUFV3P56181 108 aaKnown RBP6.89□□□□□ -1.31
CSMD1-212ENST00000523387 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 LY6LH3BQJ8 138 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 SAA4P35542 130 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 PRR30Q53SZ7 412 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-212ENST00000523387 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 TNFRSF18Q9Y5U5 241 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 GATA3P23771 443 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 UBE2D1P51668 147 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 Q6ZS46 218 aa6.89□□□□□ -1.31
CSMD1-212ENST00000523387 TLN1Q9Y490 2541 aaKnown RBP6.88□□□□□ -1.31
CSMD1-212ENST00000523387 TNFRSF13BO14836 293 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-212ENST00000523387 SMCPP49901 116 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-212ENST00000523387 Q8N1Y9 231 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 C3orf56Q8N813 242 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 Q8N9W7 124 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 SPG11Q96JI7 2443 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 SUMO4Q6EEV6 95 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 JPT2Q9H910 190 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 SORL1Q92673 2214 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 OTOGLQ3ZCN5 2332 aa6.88□□□□□ -1.31
CSMD1-212ENST00000523387 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-212ENST00000523387 OVOL3O00110 214 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms