RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GSN-AS1Q9NRJ2 163 aa15.47■□□□□ 0.07
R3HCC1-208ENST00000522012 RIGQ13278 110 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 RRN3P1Q2M238 152 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 SPANXN1Q5VSR9 72 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 Q6ZWC4 215 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 C9orf85Q96MD7 179 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 SCRT2Q9NQ03 307 aa15.46■□□□□ 0.07
R3HCC1-208ENST00000522012 NTF3P20783 257 aa15.45■□□□□ 0.06
R3HCC1-208ENST00000522012 CAMPP49913 170 aa15.45■□□□□ 0.06
R3HCC1-208ENST00000522012 TWIST1Q15672 202 aa15.45■□□□□ 0.06
R3HCC1-208ENST00000522012 MGAM2Q2M2H8 2515 aa15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 CACNG7P62955 275 aa15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 ATP5L2Q7Z4Y8 100 aa15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 C11orf72Q8NBR9 251 aa15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 TMEM263Q8WUH6 116 aaKnown RBP15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 MEGF8Q7Z7M0 2845 aa15.44■□□□□ 0.06
R3HCC1-208ENST00000522012 M0R381 172 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 HBBP68871 147 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 OR11H2Q8NH07 326 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 RNASE8Q8TDE3 154 aaKnown RBP15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 RNF183Q96D59 192 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 X6R8D5 127 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 RAB5AP20339 215 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 WDR73Q6P4I2 378 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 C16orf74Q96GX8 76 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 CNFNQ9BYD5 112 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 MSRB1Q9NZV6 116 aa15.43■□□□□ 0.06
R3HCC1-208ENST00000522012 A0A1B0GXF2 115 aa15.42■□□□□ 0.06
R3HCC1-208ENST00000522012 RAB4BP61018 213 aa15.42■□□□□ 0.06
R3HCC1-208ENST00000522012 ZNF493Q6ZR52 646 aa15.42■□□□□ 0.06
R3HCC1-208ENST00000522012 SMIM9A6NGZ8 99 aa15.41■□□□□ 0.06
R3HCC1-208ENST00000522012 SNURFLB1AK76 121 aa15.41■□□□□ 0.06
R3HCC1-208ENST00000522012 DMRTA1Q5VZB9 504 aa15.41■□□□□ 0.06
R3HCC1-208ENST00000522012 ZFP82Q8N141 532 aa15.41■□□□□ 0.06
R3HCC1-208ENST00000522012 SPXQ9BT56 116 aa15.41■□□□□ 0.06
R3HCC1-208ENST00000522012 IGHV4-4A0A075B6R2 117 aa15.4■□□□□ 0.06
R3HCC1-208ENST00000522012 A0A1B0GW15 77 aa15.4■□□□□ 0.06
R3HCC1-208ENST00000522012 RPS10P46783 165 aaKnown RBP15.4■□□□□ 0.06
R3HCC1-208ENST00000522012 RASL11AQ6T310 242 aa15.4■□□□□ 0.06
R3HCC1-208ENST00000522012 SYT8Q8NBV8 401 aa15.4■□□□□ 0.06
R3HCC1-208ENST00000522012 S100A8P05109 93 aa15.39■□□□□ 0.05
R3HCC1-208ENST00000522012 MRAPQ8TCY5 172 aa15.39■□□□□ 0.05
R3HCC1-208ENST00000522012 M0R2P5 195 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 EMP1P54849 157 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 ZNF876PQ49A33 203 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 SBSPONQ8IVN8 264 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 OVOL2Q9BRP0 275 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 RETNQ9HD89 108 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 COX19Q49B96 90 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 TMEM136Q6ZRR5 245 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 GNB1LQ9BYB4 327 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 NOP10Q9NPE3 64 aaKnown RBP15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 TP53TG1Q9Y2A0 90 aa15.38■□□□□ 0.05
R3HCC1-208ENST00000522012 PLAC8L1A1L4L8 177 aa15.37■□□□□ 0.05
R3HCC1-208ENST00000522012 NXPH4O95158 308 aa15.37■□□□□ 0.05
R3HCC1-208ENST00000522012 IL17DQ8TAD2 202 aa15.37■□□□□ 0.05
R3HCC1-208ENST00000522012 MRPL16Q9NX20 251 aaKnown RBP15.37■□□□□ 0.05
R3HCC1-208ENST00000522012 SMIM15Q7Z3B0 74 aa15.36■□□□□ 0.05
R3HCC1-208ENST00000522012 TRAPPC1Q9Y5R8 145 aa15.36■□□□□ 0.05
R3HCC1-208ENST00000522012 IGHV4-28A0A0C4DH34 117 aa15.35■□□□□ 0.05
R3HCC1-208ENST00000522012 TRGC1P0CF51 173 aa15.35■□□□□ 0.05
R3HCC1-208ENST00000522012 MIFP14174 115 aa15.35■□□□□ 0.05
R3HCC1-208ENST00000522012 DAZ2Q13117 558 aaKnown RBP15.35■□□□□ 0.05
R3HCC1-208ENST00000522012 FRZBQ92765 325 aa15.35■□□□□ 0.05
R3HCC1-208ENST00000522012 TRGV1A0A0A0MS02 117 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 EVI2AP22794 236 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 DEFA6Q01524 100 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 PTH2Q96A98 100 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 JPT2Q9H910 190 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 NOTCH1P46531 2555 aa15.34■□□□□ 0.05
R3HCC1-208ENST00000522012 DNAH3Q8TD57 4116 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 DEFB4AO15263 64 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 HLA-DQA1P01909 254 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 MT-ND6P03923 174 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 C14orf178Q8N769 122 aaPredicted RBP15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 AP1S3Q96PC3 154 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 TMEM191AQ9H0A3 160 aa15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 MRPL18Q9H0U6 180 aaKnown RBP15.33■□□□□ 0.05
R3HCC1-208ENST00000522012 FABP9Q0Z7S8 132 aa15.33■□□□□ 0.04
R3HCC1-208ENST00000522012 Q8NAQ8 132 aa15.33■□□□□ 0.04
R3HCC1-208ENST00000522012 GATD1Q8NB37 220 aa15.33■□□□□ 0.04
R3HCC1-208ENST00000522012 APCSP02743 223 aa15.32■□□□□ 0.04
R3HCC1-208ENST00000522012 TRGC2P03986 189 aa15.32■□□□□ 0.04
R3HCC1-208ENST00000522012 Q6ZTI0 123 aa15.32■□□□□ 0.04
R3HCC1-208ENST00000522012 RASL10AQ92737 203 aa15.32■□□□□ 0.04
R3HCC1-208ENST00000522012 SMIM17P0DL12 118 aa15.31■□□□□ 0.04
R3HCC1-208ENST00000522012 LGALS9BQ3B8N2 356 aa15.31■□□□□ 0.04
R3HCC1-208ENST00000522012 PIK3CD-AS1Q5SR53 167 aa15.31■□□□□ 0.04
R3HCC1-208ENST00000522012 AMN1Q8IY45 258 aa15.31■□□□□ 0.04
R3HCC1-208ENST00000522012 SPATA25Q9BR10 227 aa15.31■□□□□ 0.04
R3HCC1-208ENST00000522012 A0A087WWL8 130 aa15.3■□□□□ 0.04
R3HCC1-208ENST00000522012 SLAQ13239 276 aa15.3■□□□□ 0.04
R3HCC1-208ENST00000522012 GAGE12BA1L429 117 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 GAGE7O76087 117 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 GAGE12FP0CL80 117 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 GAGE12GP0CL81 117 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 GAGE12IP0CL82 117 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 FAM104BQ5XKR9 115 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 TM2D3Q9BRN9 247 aa15.29■□□□□ 0.04
R3HCC1-208ENST00000522012 SAMD10Q9BYL1 202 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms