RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TP53TG1Q9Y2A0 90 aa6.49□□□□□ -1.37
CSMD1-208ENST00000520561 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 MUC21A0A0G2JKD1 596 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 M0R381 172 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 SPRY2O43597 315 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 HBBP68871 147 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 COX19Q49B96 90 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-208ENST00000520561 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 OR11H2Q8NH07 326 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 OR10AG1Q8NH19 301 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 FAM210BQ96KR6 192 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 YPEL4Q96NS1 127 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 SPXQ9BT56 116 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-208ENST00000520561 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
CSMD1-208ENST00000520561 M0R2P5 195 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 TRGC1P0CF51 173 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 MIFP14174 115 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 AZU1P20160 251 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 SSTP61278 116 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 TWIST1Q15672 202 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 WDR73Q6P4I2 378 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 RASL11AQ6T310 242 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 SMIM15Q7Z3B0 74 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 ZNF575Q86XF7 245 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 AP1S3Q96PC3 154 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 SPATA25Q9BR10 227 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 CNFNQ9BYD5 112 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 X6R8D5 127 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 CMYA5Q8N3K9 4069 aa6.47□□□□□ -1.37
CSMD1-208ENST00000520561 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 NXPH4O95158 308 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 PRM2P04554 102 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 CAMPP49913 170 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 RAB4BP61018 213 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 IL17DQ8TAD2 202 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 RETNQ9HD89 108 aa6.46□□□□□ -1.38
CSMD1-208ENST00000520561 MGAM2Q2M2H8 2515 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 IGHV4-4A0A075B6R2 117 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 TRGV1A0A0A0MS02 117 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 IGHV4-28A0A0C4DH34 117 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 COLCA2A8K830 154 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 HLA-DQA1P01909 254 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 MT-ND6P03923 174 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 RAB5AP20339 215 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 NTF3P20783 257 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 EMP1P54849 157 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 DAZ2Q13117 558 aaKnown RBP6.45□□□□□ -1.38
CSMD1-208ENST00000520561 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 PIK3CD-AS1Q5SR53 167 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 PTH2Q96A98 100 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 OVOL2Q9BRP0 275 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 NDUFAF3Q9BU61 184 aa6.45□□□□□ -1.38
CSMD1-208ENST00000520561 MRPL16Q9NX20 251 aaKnown RBP6.45□□□□□ -1.38
CSMD1-208ENST00000520561 PLAC8L1A1L4L8 177 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 SMIM17P0DL12 118 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 RPS10P46783 165 aaKnown RBP6.44□□□□□ -1.38
CSMD1-208ENST00000520561 DMRTA1Q5VZB9 504 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 TMEM136Q6ZRR5 245 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 SBSPONQ8IVN8 264 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 Q8NAQ8 132 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 FRZBQ92765 325 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 TM2D3Q9BRN9 247 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 GNB1LQ9BYB4 327 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 ZMAT4Q9H898 229 aa6.44□□□□□ -1.38
CSMD1-208ENST00000520561 NOP10Q9NPE3 64 aaKnown RBP6.44□□□□□ -1.38
CSMD1-208ENST00000520561 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 LYRM9A8MSI8 78 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 A8MWV9 139 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 MGPP08493 103 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 DEFA6Q01524 100 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 LGALS9BQ3B8N2 356 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 GATD1Q8NB37 220 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 B9D2Q9BPU9 175 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 TMEM191AQ9H0A3 160 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 DPH3P1Q9H4G8 78 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
CSMD1-208ENST00000520561 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 RHODO00212 210 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 APCSP02743 223 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 EVI2AP22794 236 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 FAM222AQ5U5X8 452 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 Q6ZTI0 123 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 RASL10AQ92737 203 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
CSMD1-208ENST00000520561 C11orf68Q9H3H3 251 aaKnown RBP6.42□□□□□ -1.38
CSMD1-208ENST00000520561 DNAH3Q8TD57 4116 aa6.42□□□□□ -1.38
CSMD1-208ENST00000520561 TRAV4A0A0B4J268 109 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 DEFB4AO15263 64 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 GAGE7O76087 117 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 FABP9Q0Z7S8 132 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 ZNF56Q15929 161 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms