RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 PSG8Q9UQ74 426 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 HSPB11Q9Y547 144 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 DNAH3Q8TD57 4116 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 LOC102724200A0A096LPH7 203 aaPredicted RBP2□□□□□ -2.09
SKP1-204ENST00000517691 BORCS7-ASMTA0A0B4J1R7 106 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TRAV5A0A0B4J249 113 aa2□□□□□ -2.09
SKP1-204ENST00000517691 KNCNA6PVL3 124 aa2□□□□□ -2.09
SKP1-204ENST00000517691 H3BRN7 92 aa2□□□□□ -2.09
SKP1-204ENST00000517691 K7EQD1 137 aa2□□□□□ -2.09
SKP1-204ENST00000517691 KRTAP5-8O75690 187 aa2□□□□□ -2.09
SKP1-204ENST00000517691 PFN1P07737 140 aaKnown RBP2□□□□□ -2.09
SKP1-204ENST00000517691 MEOX2P50222 304 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TCTAP57738 103 aa2□□□□□ -2.09
SKP1-204ENST00000517691 RAB5BP61020 215 aa2□□□□□ -2.09
SKP1-204ENST00000517691 RHOBP62745 196 aa2□□□□□ -2.09
SKP1-204ENST00000517691 ACOT6Q3I5F7 207 aaPredicted RBP2□□□□□ -2.09
SKP1-204ENST00000517691 PATE2Q6UY27 113 aa2□□□□□ -2.09
SKP1-204ENST00000517691 SBSPONQ8IVN8 264 aa2□□□□□ -2.09
SKP1-204ENST00000517691 FAM24BQ8N5W8 94 aa2□□□□□ -2.09
SKP1-204ENST00000517691 OR10J6PQ8NGY7 276 aa2□□□□□ -2.09
SKP1-204ENST00000517691 RNF185Q96GF1 192 aa2□□□□□ -2.09
SKP1-204ENST00000517691 GPR82Q96P67 336 aa2□□□□□ -2.09
SKP1-204ENST00000517691 B9D2Q9BPU9 175 aa2□□□□□ -2.09
SKP1-204ENST00000517691 C2orf88Q9BSF0 95 aa2□□□□□ -2.09
SKP1-204ENST00000517691 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
SKP1-204ENST00000517691 GGTLC1Q9BX51 225 aa2□□□□□ -2.09
SKP1-204ENST00000517691 NPCDR1Q9BY65 106 aa2□□□□□ -2.09
SKP1-204ENST00000517691 WDR61Q9GZS3 305 aaKnown RBP2□□□□□ -2.09
SKP1-204ENST00000517691 RNASE7Q9H1E1 156 aaKnown RBP2□□□□□ -2.09
SKP1-204ENST00000517691 KCNIP2Q9NS61 270 aa2□□□□□ -2.09
SKP1-204ENST00000517691 PXMP4Q9Y6I8 212 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TGP01266 2768 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TRAV2A0A0B4J234 112 aa2□□□□□ -2.09
SKP1-204ENST00000517691 IGKV3-20P01619 116 aa2□□□□□ -2.09
SKP1-204ENST00000517691 RPL7P18124 248 aaKnown RBP2□□□□□ -2.09
SKP1-204ENST00000517691 TWIST1Q15672 202 aa2□□□□□ -2.09
SKP1-204ENST00000517691 SAMD13Q5VXD3 122 aa2□□□□□ -2.09
SKP1-204ENST00000517691 EBLN2Q6P2I7 272 aa2□□□□□ -2.09
SKP1-204ENST00000517691 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TRPT1Q86TN4 253 aaKnown RBP2□□□□□ -2.09
SKP1-204ENST00000517691 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
SKP1-204ENST00000517691 DCANP1Q8TF63 244 aa2□□□□□ -2.09
SKP1-204ENST00000517691 AQP10Q96PS8 301 aa2□□□□□ -2.09
SKP1-204ENST00000517691 EDA2RQ9HAV5 297 aa2□□□□□ -2.09
SKP1-204ENST00000517691 XCL2Q9UBD3 114 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
SKP1-204ENST00000517691 TIMM9Q9Y5J7 89 aa2□□□□□ -2.09
SKP1-204ENST00000517691 RFNGQ9Y644 331 aa2□□□□□ -2.09
SKP1-204ENST00000517691 SMIM26A0A096LP01 95 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 H0Y9J4 135 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 ISLRO14498 428 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 OR7C2O60412 319 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 PFDN1O60925 122 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 CT45A10P0DMU9 189 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
SKP1-204ENST00000517691 PSMB3P49720 205 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 NDUFV3P56181 108 aaKnown RBP1.99□□□□□ -2.09
SKP1-204ENST00000517691 DEFB1P60022 68 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 CKS1BP61024 79 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 TMEM78Q5T7P6 136 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 RPL7L1Q6DKI1 246 aaKnown RBP1.99□□□□□ -2.09
SKP1-204ENST00000517691 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 MIR17HGQ75NE6 70 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 RNF182Q8N6D2 247 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 OR4B1Q8NGF8 309 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 OR10G4Q8NGN3 311 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 OR10G7Q8NGN6 311 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 FXYD5Q96DB9 178 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 VPS25Q9BRG1 176 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 GNB1LQ9BYB4 327 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 RPRMQ9NS64 109 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 FUT9Q9Y231 359 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 U3KQK5 164 aa1.99□□□□□ -2.09
SKP1-204ENST00000517691 NBEAL2Q6ZNJ1 2754 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TRAV8-6A0A0B4J262 113 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 A0A0D9SG52 128 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 A0A1B0GVG6 124 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 KANTRA0A1W2PQU2 76 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 A0A1W2PRE2 83 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 MAP1LC3B2A6NCE7 125 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF705FA8MVS1 300 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 H3BQ15 152 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 K7EP13 123 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 HMGB3O15347 200 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 DLEU1O43261 78 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 NDUFS5O43920 106 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ATP5G1P05496 136 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF705DP0CH99 300 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF705BP0CI00 300 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 PYYP10082 97 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ATP6V0CP27449 155 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 HLA-DMBP28068 263 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 FXYD7P58549 80 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TAS2R45P59539 299 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 DEFB135Q30KP9 77 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 KIAA1644Q3SXP7 199 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 KHDC3LQ587J8 217 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 OR2G3Q8NGZ4 309 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 GNPNAT1Q96EK6 184 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 PAXXQ9BUH6 204 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms