RNA–Protein interactions for RNA: ENST00000516959.1

RNU6-856P-201, Transcript of RNA, U6 small nuclear 856, pseudogene, humanhuman

BASIC

Gene RNU6-856P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-856P-201ENST00000516959 CCDC153Q494R4 210 aa0.09□□□□□ -2.4
RNU6-856P-201ENST00000516959 VPS25Q9BRG1 176 aa0.09□□□□□ -2.4
RNU6-856P-201ENST00000516959 LSM2Q9Y333 95 aaKnown RBP0.09□□□□□ -2.4
RNU6-856P-201ENST00000516959 PTPRGP23470 1445 aa0.09□□□□□ -2.4
RNU6-856P-201ENST00000516959 CACNA1EQ15878 2313 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 TCRBV3S1A0A5B6 114 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 F2Z2F3 143 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 EMX2Q04743 252 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 OR2T2Q6IF00 324 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 ATP11AUNQ6ZP68 121 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 ATP6V0E2Q8NHE4 81 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 AIF1LQ9BQI0 150 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 PRR15LQ9BU68 103 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 MYH1P12882 1939 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 ATG2AQ2TAZ0 1938 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 RBBP6Q7Z6E9 1792 aaKnown RBP0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 KIDINS220Q9ULH0 1771 aa0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 AFDNP55196 1824 aaKnown RBP0.08□□□□□ -2.4
RNU6-856P-201ENST00000516959 HELZP42694 1942 aaKnown RBP0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 BLMP54132 1417 aaPredicted RBP0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 TRAV12-2A0A075B6T6 113 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 J3QLW9 94 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 M0R129 80 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 DBIP07108 87 aaKnown RBP0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 NPC2P61916 151 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 DR1Q01658 176 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 HIST1H1AQ02539 215 aaPredicted RBP0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 CYP2G1PQ6ZSU1 146 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 AKAP14Q86UN6 197 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 MAGOHBQ96A72 148 aaKnown RBP0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 SPANXA1Q9NS26 97 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 SPANXCQ9NY87 97 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 RREB1Q92766 1687 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 CCDC171Q6TFL3 1326 aa0.07□□□□□ -2.4
RNU6-856P-201ENST00000516959 SYNJ1O43426 1573 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 TRAV2A0A0B4J234 112 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 RBAKDNA6NC62 111 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 M0R2P5 195 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 SPINK1P00995 79 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 CKS1BP61024 79 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 NCS1P62166 190 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 C4orf33Q8N1A6 199 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 C20orf197Q8N268 126 aa0.06□□□□□ -2.4
RNU6-856P-201ENST00000516959 DLEC1Q9Y238 1755 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 SYNE2Q8WXH0 6885 aaKnown RBP0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 TRBV20-1A0A075B6N2 111 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 GVQW2A0A096LPI5 108 aaPredicted RBP0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 TRAV12-3A0A0B4J271 114 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 FAM236AA0A1B0GUQ0 79 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 FAM236BA0A1B0GV22 79 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 YPEL1O60688 119 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 IGLC6P0CF74 106 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 SCGB1A1P11684 91 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 COX4I1P13073 169 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 Q5BKY6 102 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 MIC13Q5XKP0 118 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 MMGT1Q8N4V1 131 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 PYDC1Q8WXC3 89 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 SMIM3Q9BZL3 60 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 BATF3Q9NR55 127 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 NDUFA12Q9UI09 145 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 ERG28Q9UKR5 140 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 XIRP1Q702N8 1843 aaKnown RBP0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 ESPL1Q14674 2120 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 ANKRD30AQ9BXX3 1397 aa0.05□□□□□ -2.4
RNU6-856P-201ENST00000516959 ERCC6Q03468 1493 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 CASZ1Q86V15 1759 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 TANC1Q9C0D5 1861 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 A0A087WTM6 91 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 TRBV7-1A0A0A6YYK4 115 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 MCRIP1C9JLW8 97 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 ARPC5O15511 151 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 LINC00694P0DN24 101 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 CCL3L1P16619 93 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 COX6A2Q02221 97 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 SSBP1Q04837 148 aaKnown RBP0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 SPCS2Q15005 226 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 MORN2Q502X0 79 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 LINC01545Q5VT33 79 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 NDUFA11Q86Y39 141 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 COX7B2Q8TF08 81 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 BPESC1Q9GZL8 116 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 V9GYV3 84 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 WDR97A6NE52 1622 aa0.04□□□□□ -2.4
RNU6-856P-201ENST00000516959 ARAP1Q96P48 1450 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 KDM5CP41229 1560 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 NAV2Q8IVL1 2488 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 CCDC179H3BU77 68 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 M0R2Z0 102 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 NMBP08949 121 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 PIRTP0C851 137 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 FAM74A4Q5TZK3 123 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 LZICQ8WZA0 190 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 Q96NJ1 140 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 SAR1AQ9NR31 198 aa0.03□□□□□ -2.4
RNU6-856P-201ENST00000516959 GSKIPQ9P0R6 139 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms