RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PTH2Q96A98 100 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 SCRT2Q9NQ03 307 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 C11orf21Q9P2W6 132 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 UBE2CO00762 179 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 ARMS2P0C7Q2 107 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 S100A4P26447 101 aaKnown RBP7.28□□□□□ -1.24
TPM3-221ENST00000513769 ASIPP42127 132 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 SNRPEP62304 92 aaKnown RBP7.28□□□□□ -1.24
TPM3-221ENST00000513769 TWIST1Q15672 202 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 ANXA2RQ3ZCQ2 193 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 MORN3Q6PF18 240 aaPredicted RBP7.28□□□□□ -1.24
TPM3-221ENST00000513769 ZFP82Q8N141 532 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 C3orf56Q8N813 242 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 C1QTNF4Q9BXJ3 329 aa7.28□□□□□ -1.24
TPM3-221ENST00000513769 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 IGHV1OR15-1A0A075B7D0 117 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 TMSB15BA0A087X1C1 80 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 DEFB1P60022 68 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 ODF3L2Q3SX64 289 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 PRR9Q5T870 116 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 GFI1BQ5VTD9 330 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 FAM104BQ5XKR9 115 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 TRPT1Q86TN4 253 aaKnown RBP7.27□□□□□ -1.25
TPM3-221ENST00000513769 PACRGQ96M98 296 aaPredicted RBP7.27□□□□□ -1.25
TPM3-221ENST00000513769 NDUFAF3Q9BU61 184 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 PHLDA3Q9Y5J5 127 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 SELENOKQ9Y6D0 94 aa7.27□□□□□ -1.25
TPM3-221ENST00000513769 LOC102724200A0A096LPH7 203 aaPredicted RBP7.26□□□□□ -1.25
TPM3-221ENST00000513769 GRIFINA4D1Z8 144 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 KNCNA6PVL3 124 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 CRXO43186 299 aaPredicted RBP7.26□□□□□ -1.25
TPM3-221ENST00000513769 GNRH2O43555 120 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 FRMD6-AS1P0C7T7 363 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 PRB4P10163 310 aaPredicted RBP7.26□□□□□ -1.25
TPM3-221ENST00000513769 ESDP10768 282 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 SPINK13Q1W4C9 94 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 SPANXN1Q5VSR9 72 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 HIST2H2BDQ6DRA6 164 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 GTSCR1Q86UQ5 136 aa7.26□□□□□ -1.25
TPM3-221ENST00000513769 ALKBH7Q9BT30 221 aaPredicted RBP7.26□□□□□ -1.25
TPM3-221ENST00000513769 PPP1R17O96001 155 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 CD7P09564 240 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 RNASE3P12724 160 aaKnown RBP7.25□□□□□ -1.25
TPM3-221ENST00000513769 SLAQ13239 276 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 SPXQ9BT56 116 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 TPPP3Q9BW30 176 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 U3KQK5 164 aa7.25□□□□□ -1.25
TPM3-221ENST00000513769 PRSS47A8MTI9 375 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 J3KRW8 73 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 M0R2Z0 102 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 NXPH4O95158 308 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 IGKV3-20P01619 116 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 RAB4AP20338 218 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 KIR3DS1Q14943 382 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 BAGE3Q86Y29 109 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 DEFB125Q8N687 156 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 SYT8Q8NBV8 401 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 C9orf85Q96MD7 179 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 NAGKQ9UJ70 344 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 SORL1Q92673 2214 aa7.24□□□□□ -1.25
TPM3-221ENST00000513769 TRAV12-2A0A075B6T6 113 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 IGHV3-16A0A0C4DH30 117 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 INSP01308 110 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 PMCHP20382 165 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 S100A2P29034 98 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 SRIP30626 198 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 ORMDL3Q8N138 153 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 Q8N1Y9 231 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 POM121L12Q8N7R1 296 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
TPM3-221ENST00000513769 LINC01587Q99440 93 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 KRTAP4-2Q9BYR5 136 aa7.23□□□□□ -1.25
TPM3-221ENST00000513769 KIR2DL5BA0A0G2JN68 375 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 KIR2DL5BA0A0G2JPC4 375 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 CBY3A6NI87 242 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 LINC00614P0C842 121 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 CKS2P33552 79 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 KIAA1644Q3SXP7 199 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 Q6ZQT7 251 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 KIR2DL5AQ8N109 375 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 OR10AG1Q8NH19 301 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 KIR2DL5BQ8NHK3 375 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 C18orf32Q8TCD1 76 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 TMEM18Q96B42 140 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 MRAP2Q96G30 205 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 DPH3P1Q9H4G8 78 aa7.22□□□□□ -1.25
TPM3-221ENST00000513769 RBMY1BA6NDE4 496 aaKnown RBP7.21□□□□□ -1.26
TPM3-221ENST00000513769 RBMY1EA6NEQ0 496 aaKnown RBP7.21□□□□□ -1.26
TPM3-221ENST00000513769 SMIM9A6NGZ8 99 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 H3BVH4 76 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 CIDEAO60543 219 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 RBMY1DP0C7P1 496 aaKnown RBP7.21□□□□□ -1.26
TPM3-221ENST00000513769 MRPL51Q4U2R6 128 aaKnown RBP7.21□□□□□ -1.26
TPM3-221ENST00000513769 PRR31Q5SQ13 230 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms