RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 PFDN5Q99471 154 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 MIXL1Q9H2W2 232 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 RAB3DO95716 219 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 SLC25A6P12236 298 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 ANXA3P12429 323 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
SFXN1-210ENST00000513725 CYCSP99999 105 aaKnown RBP6.95□□□□□ -1.3
SFXN1-210ENST00000513725 REG3AQ06141 175 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
SFXN1-210ENST00000513725 GPR132Q9UNW8 380 aa6.95□□□□□ -1.3
SFXN1-210ENST00000513725 DUXBA0A1W2PPF3 345 aa6.94□□□□□ -1.3
SFXN1-210ENST00000513725 PTTG1O95997 202 aa6.94□□□□□ -1.3
SFXN1-210ENST00000513725 PYYP10082 97 aa6.94□□□□□ -1.3
SFXN1-210ENST00000513725 RBX1P62877 108 aa6.94□□□□□ -1.3
SFXN1-210ENST00000513725 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
SFXN1-210ENST00000513725 C15orf56Q8N910 161 aa6.94□□□□□ -1.3
SFXN1-210ENST00000513725 LOC100506127A0A0U1RQW1 187 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 RAB5CP51148 216 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 TAS2R19P59542 299 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 RAB2AP61019 212 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 UBE2D3P61077 147 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 UBE2D2P62837 147 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 EIF5AP63241 154 aaKnown RBP6.93□□□□□ -1.3
SFXN1-210ENST00000513725 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 UFSP1Q6NVU6 142 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 MGST2Q99735 147 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 PSENENQ9NZ42 101 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 COMMD3Q9UBI1 195 aa6.93□□□□□ -1.3
SFXN1-210ENST00000513725 TRBV7-3A0A075B6L6 115 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 TRAV6A0A075B6T7 132 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 RHODO00212 210 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 AMTP48728 403 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 S100A10P60903 97 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 TMEM229BQ8NBD8 167 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 DYNC2LI1Q8TCX1 351 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 TMED6Q8WW62 240 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 VCXQ9H320 206 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 RABL2AQ9UBK7 228 aaPredicted RBP6.92□□□□□ -1.3
SFXN1-210ENST00000513725 MTFP1Q9UDX5 166 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 RABL2BQ9UNT1 228 aa6.92□□□□□ -1.3
SFXN1-210ENST00000513725 TRBV10-1A0A0K0K1A3 114 aa6.91□□□□□ -1.3
SFXN1-210ENST00000513725 METTL15P1P0C7V9 234 aa6.91□□□□□ -1.3
SFXN1-210ENST00000513725 CAMLGP49069 296 aa6.91□□□□□ -1.3
SFXN1-210ENST00000513725 DISC1C4P0D8 188 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 F6UZH7 168 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 EIF3GO75821 320 aaKnown RBP eCLIP6.9□□□□□ -1.3
SFXN1-210ENST00000513725 APOA1P02647 267 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 NBEAP1P0C6P0 100 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 PRR27Q6MZM9 219 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 FAAP20Q6NZ36 180 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.9□□□□□ -1.3
SFXN1-210ENST00000513725 BLOC1S6Q9UL45 172 aa6.9□□□□□ -1.3
SFXN1-210ENST00000513725 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 LCE2BO14633 110 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 RNASE3P12724 160 aaKnown RBP6.89□□□□□ -1.31
SFXN1-210ENST00000513725 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
SFXN1-210ENST00000513725 GAGE6Q13070 117 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 JPT2Q9H910 190 aa6.89□□□□□ -1.31
SFXN1-210ENST00000513725 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 GGACTQ9BVM4 153 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 TREM1Q9NP99 234 aa6.88□□□□□ -1.31
SFXN1-210ENST00000513725 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
SFXN1-210ENST00000513725 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
SFXN1-210ENST00000513725 PHF5AQ7RTV0 110 aaKnown RBP6.87□□□□□ -1.31
SFXN1-210ENST00000513725 NRARPQ7Z6K4 114 aa6.87□□□□□ -1.31
SFXN1-210ENST00000513725 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
SFXN1-210ENST00000513725 DIRAS2Q96HU8 199 aa6.87□□□□□ -1.31
SFXN1-210ENST00000513725 NAA50Q9GZZ1 169 aaKnown RBP6.87□□□□□ -1.31
SFXN1-210ENST00000513725 PPDPFQ9H3Y8 114 aa6.87□□□□□ -1.31
SFXN1-210ENST00000513725 RPP21Q9H633 154 aaKnown RBP6.87□□□□□ -1.31
SFXN1-210ENST00000513725 A0A087WZ39 114 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 GAGE2BQ13066 116 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 TMEM97Q5BJF2 176 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 SMIM8Q96KF7 97 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 PRRT1Q99946 306 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 PHLDA3Q9Y5J5 127 aa6.86□□□□□ -1.31
SFXN1-210ENST00000513725 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 SSSCA1O60232 199 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 S100A4P26447 101 aaKnown RBP6.85□□□□□ -1.31
SFXN1-210ENST00000513725 RANP62826 216 aaKnown RBP6.85□□□□□ -1.31
SFXN1-210ENST00000513725 ID3Q02535 119 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 SLC25A2Q9BXI2 301 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 SLIRPQ9GZT3 109 aaKnown RBP6.85□□□□□ -1.31
SFXN1-210ENST00000513725 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
SFXN1-210ENST00000513725 M0R2T5 61 aa6.84□□□□□ -1.31
SFXN1-210ENST00000513725 RPS19P39019 145 aaKnown RBP6.84□□□□□ -1.31
SFXN1-210ENST00000513725 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms