RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TENM3Q9P273 2699 aa9□□□□□ -0.97
PDPN-210ENST00000513143 FAM231BA6NCW3 169 aa9□□□□□ -0.97
PDPN-210ENST00000513143 ARMS2P0C7Q2 107 aa9□□□□□ -0.97
PDPN-210ENST00000513143 S100A1P23297 94 aa9□□□□□ -0.97
PDPN-210ENST00000513143 FOXA3P55318 350 aaPredicted RBP9□□□□□ -0.97
PDPN-210ENST00000513143 FER1L6-AS1Q8NA97 138 aa9□□□□□ -0.97
PDPN-210ENST00000513143 GTSF1Q8WW33 167 aa9□□□□□ -0.97
PDPN-210ENST00000513143 SCRT2Q9NQ03 307 aa9□□□□□ -0.97
PDPN-210ENST00000513143 RPS10P5Q9NQ39 176 aa9□□□□□ -0.97
PDPN-210ENST00000513143 A0A1W2PPQ1 181 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 SNURFLB1AK76 121 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 H3BVH4 76 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 SNAI2O43623 268 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
PDPN-210ENST00000513143 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 SPXQ9BT56 116 aa8.99□□□□□ -0.97
PDPN-210ENST00000513143 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
PDPN-210ENST00000513143 HIGD1CA8MV81 97 aa8.98□□□□□ -0.97
PDPN-210ENST00000513143 F2Z2F3 143 aa8.98□□□□□ -0.97
PDPN-210ENST00000513143 IMMP2LQ96T52 175 aa8.98□□□□□ -0.97
PDPN-210ENST00000513143 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
PDPN-210ENST00000513143 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
PDPN-210ENST00000513143 M0R2P5 195 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 DEFB4AO15263 64 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 CTRLP40313 264 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 EMP1P54849 157 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 LYZL1Q6UWQ5 148 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 NUP35Q8NFH5 326 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 PTH2Q96A98 100 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 TPPP3Q9BW30 176 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 NOP10Q9NPE3 64 aaKnown RBP8.97□□□□□ -0.97
PDPN-210ENST00000513143 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
PDPN-210ENST00000513143 SPINK4O60575 86 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 WDR73Q6P4I2 378 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 PGLYRP4Q96LB8 373 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 CNFNQ9BYD5 112 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 PHLDA3Q9Y5J5 127 aa8.96□□□□□ -0.98
PDPN-210ENST00000513143 IGHV4-4A0A075B6R2 117 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 A0A0J9YWU9 116 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 LYRM9A8MSI8 78 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 NXPH4O95158 308 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 CACNG7P62955 275 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 RASL10AQ92737 203 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
PDPN-210ENST00000513143 FBN3Q75N90 2809 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 CXorf65A6NEN9 183 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 FAM3BP58499 235 aaPredicted RBP8.94□□□□□ -0.98
PDPN-210ENST00000513143 ZNF876PQ49A33 203 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 KCNIP4Q6PIL6 250 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 Q6ZTI0 123 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 ZFP82Q8N141 532 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 SYT8Q8NBV8 401 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
PDPN-210ENST00000513143 MRPL16Q9NX20 251 aaKnown RBP8.94□□□□□ -0.98
PDPN-210ENST00000513143 TRGV1A0A0A0MS02 117 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 A0A1B0GUT8 65 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 TEX48A0A1B0GUV7 120 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 M0R381 172 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 NTF3P20783 257 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 S100PP25815 95 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 CELA1Q9UNI1 258 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 NACAE9PAV3 2078 aa8.93□□□□□ -0.98
PDPN-210ENST00000513143 TRAV9-1A0A075B6T8 112 aa8.92□□□□□ -0.98
PDPN-210ENST00000513143 SSTP61278 116 aa8.92□□□□□ -0.98
PDPN-210ENST00000513143 MSRB1Q9NZV6 116 aa8.92□□□□□ -0.98
PDPN-210ENST00000513143 URGCP-MRPS24S4R325 110 aa8.92□□□□□ -0.98
PDPN-210ENST00000513143 U3KQK5 164 aa8.92□□□□□ -0.98
PDPN-210ENST00000513143 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 GAGE7O76087 117 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 RIGQ13278 110 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 TWIST1Q15672 202 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 ATP5L2Q7Z4Y8 100 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 SMCO4Q9NRQ5 59 aa8.91□□□□□ -0.98
PDPN-210ENST00000513143 RS1O15537 224 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 DEFB130BP0DP73 79 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 DEFB130AP0DP74 79 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 ELOBQ15370 118 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 TMEM88Q6PEY1 159 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 POM121L12Q8N7R1 296 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 JPT2Q9H910 190 aa8.9□□□□□ -0.98
PDPN-210ENST00000513143 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms