RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 NBEAP1P0C6P0 100 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 AKAIN1P0CW23 69 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 PKIAP61925 76 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 ARL16Q0P5N6 197 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 CLVS1Q8IUQ0 354 aaPredicted RBP6.46□□□□□ -1.38
SNF8-207ENST00000509995 DYNC2LI1Q8TCX1 351 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 PHYHIPLQ96FC7 376 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
SNF8-207ENST00000509995 RNASE3P12724 160 aaKnown RBP6.45□□□□□ -1.38
SNF8-207ENST00000509995 UBE2D3P61077 147 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 UBE2D2P62837 147 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 CHCHD5Q9BSY4 110 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 CDIP1Q9H305 208 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 JPT2Q9H910 190 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 EXTL2Q9UBQ6 330 aa6.45□□□□□ -1.38
SNF8-207ENST00000509995 PTTG1O95997 202 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
SNF8-207ENST00000509995 LSM3P62310 102 aaKnown RBP6.44□□□□□ -1.38
SNF8-207ENST00000509995 LGALSLQ3ZCW2 172 aaPredicted RBP6.44□□□□□ -1.38
SNF8-207ENST00000509995 PIK3CD-AS1Q5SR53 167 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 C15orf40Q8WUR7 153 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 C11orf21Q9P2W6 132 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 SCP2D1Q9UJQ7 156 aa6.44□□□□□ -1.38
SNF8-207ENST00000509995 H0Y9J4 135 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RHODO00212 210 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 TSPAN13O95857 204 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 MT-ND6P03923 174 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RPL29P47914 159 aaKnown RBP6.43□□□□□ -1.38
SNF8-207ENST00000509995 UBE2D1P51668 147 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RBX1P62877 108 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RPL36AP83881 106 aaKnown RBP6.43□□□□□ -1.38
SNF8-207ENST00000509995 REG3AQ06141 175 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 TMEM128Q5BJH2 165 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RPL36ALQ969Q0 106 aaKnown RBP6.43□□□□□ -1.38
SNF8-207ENST00000509995 FXYD5Q96DB9 178 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 TVP23CQ96ET8 276 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 FAM167A-AS1Q96KT0 104 aa6.43□□□□□ -1.38
SNF8-207ENST00000509995 RABL2AQ9UBK7 228 aaPredicted RBP6.43□□□□□ -1.38
SNF8-207ENST00000509995 TRBV7-3A0A075B6L6 115 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 TRBV10-1A0A0K0K1A3 114 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 TSC22D2O75157 780 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 GZMBP10144 247 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 NEDD8Q15843 81 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 SUN5Q8TC36 379 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 DIRAS2Q96HU8 199 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 TREM1Q9NP99 234 aa6.42□□□□□ -1.38
SNF8-207ENST00000509995 TRAV8-4A0A0B4J246 113 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 P01737 135 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 CRYGAP11844 174 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 S100A10P60903 97 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 RANP62826 216 aaKnown RBP6.41□□□□□ -1.38
SNF8-207ENST00000509995 MRPS10P82664 201 aaKnown RBP6.41□□□□□ -1.38
SNF8-207ENST00000509995 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 GCSAMLQ5JQS6 135 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 FAM74A4Q5TZK3 123 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 SMIM4Q8WVI0 70 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
SNF8-207ENST00000509995 RAB5CP51148 216 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 TAS2R30P59541 319 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 BCL7BQ9BQE9 202 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 MCUBQ9NWR8 336 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 PKIGQ9Y2B9 76 aa6.4□□□□□ -1.38
SNF8-207ENST00000509995 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
SNF8-207ENST00000509995 ZNF80P51504 273 aaPredicted RBP6.39□□□□□ -1.39
SNF8-207ENST00000509995 MZT2AQ6P582 158 aa6.39□□□□□ -1.39
SNF8-207ENST00000509995 MIR17HGQ75NE6 70 aa6.39□□□□□ -1.39
SNF8-207ENST00000509995 ARL6IP6Q8N6S5 226 aa6.39□□□□□ -1.39
SNF8-207ENST00000509995 SLIRPQ9GZT3 109 aaKnown RBP6.39□□□□□ -1.39
SNF8-207ENST00000509995 ANKRD20A5PA0PJZ0 165 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 SFT2D2O95562 160 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 GAGE6Q13070 117 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 PPP1R1AQ13522 171 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 OR10G8Q8NGN5 311 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 HYLS1Q96M11 299 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 UQCC1Q9NVA1 299 aa6.38□□□□□ -1.39
SNF8-207ENST00000509995 UBE2L5PA0A1B0GUS4 154 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 SCGB1D2O95969 90 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 NCS1P62166 190 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 BAXQ07812 192 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 NMES1Q9C002 83 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 MIXL1Q9H2W2 232 aa6.37□□□□□ -1.39
SNF8-207ENST00000509995 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
SNF8-207ENST00000509995 C7orf66A4D0T2 115 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 OR7C2O60412 319 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
SNF8-207ENST00000509995 AMTP48728 403 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 RAB2AP61019 212 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
SNF8-207ENST00000509995 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 MLST8Q9BVC4 326 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms