RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 TRBV27A0A0K0K1C4 114 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 J3QR89 54 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 ADGRG4Q8IZF6 3080 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 C11orf86A6NJI1 115 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 TCTAP57738 103 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 C9orf85Q96MD7 179 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 CITED2Q99967 270 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
PDGFRA-208ENST00000509490 HRNRQ86YZ3 2850 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 TSHBP01222 138 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 PRADC1Q9BSG0 188 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 DAZ1Q9NQZ3 744 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 PTPRQQ9UMZ3 2332 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 M0QXV9 152 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 VCYO14598 125 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 CD7P09564 240 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 S100A4P26447 101 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 UBE2D3P61077 147 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 UBE2D2P62837 147 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 C14orf178Q8N769 122 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 UBTD1Q9HAC8 227 aa6.92□□□□□ -1.3
PDGFRA-208ENST00000509490 GVINP1Q7Z2Y8 2422 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 IGHV4-39P01824 125 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 PMVKQ15126 192 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 RHOHQ15669 191 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 CD300EQ496F6 205 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 DCANP1Q8TF63 244 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 ZNF256Q9Y2P7 627 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 HOXA3O43365 443 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 NSUN5P1Q3KNT7 163 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 ZFP2Q6ZN57 461 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 DMXL2Q8TDJ6 3036 aa6.91□□□□□ -1.3
PDGFRA-208ENST00000509490 ID1P41134 155 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 HERVK_113P61574 105 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 CITED1Q99966 193 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 RHPN1-AS1Q9BWJ2 59 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 ATMQ13315 3056 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 TMEM219Q86XT9 240 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 AMELXQ99217 191 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 PIMREGQ9BSJ6 248 aa6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 MAP1BP46821 2468 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-208ENST00000509490 TLN1Q9Y490 2541 aaKnown RBP6.9□□□□□ -1.31
PDGFRA-208ENST00000509490 A0A0J9YY99 117 aa6.9□□□□□ -1.31
PDGFRA-208ENST00000509490 H3BMG7 143 aa6.9□□□□□ -1.31
PDGFRA-208ENST00000509490 RNASE4P34096 147 aaKnown RBP6.9□□□□□ -1.31
PDGFRA-208ENST00000509490 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.31
PDGFRA-208ENST00000509490 A0A0J9YX75 114 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 GNRH2O43555 120 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 WFDC2Q14508 124 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 SUMO4Q6EEV6 95 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 CRYBA4P53673 196 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 SLC25A29Q8N8R3 303 aa6.89□□□□□ -1.31
PDGFRA-208ENST00000509490 IGHV3-16A0A0C4DH30 117 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 A8MTW9 85 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 PTH2Q96A98 100 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 SPAG8Q99932 426 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-208ENST00000509490 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 TGFAP01135 160 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 GATA3P23771 443 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 PSMB8P28062 276 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 FAM159AQ6UWV7 190 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 KLK15Q9H2R5 256 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 VCX2Q9H322 139 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 PRORYQ9H606 182 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 IGHV4-61A0A0C4DH41 118 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 IGHV3-30P01768 117 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 MGPP08493 103 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 IGHV3-30-5P0DP03 117 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 MDFICQ9P1T7 246 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 MUC4Q99102 2169 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 M0QY20 66 aa6.87□□□□□ -1.31
PDGFRA-208ENST00000509490 TSPAN13O95857 204 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms