RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
DDX41-208ENST00000507955 ANXA2RQ3ZCQ2 193 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 ACANP16112 2415 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 OCIAD2Q56VL3 154 aa10.91□□□□□ -0.66
DDX41-208ENST00000507955 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
DDX41-208ENST00000507955 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
DDX41-208ENST00000507955 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
DDX41-208ENST00000507955 GATA3P23771 443 aa10.91□□□□□ -0.66
DDX41-208ENST00000507955 ODF1Q14990 250 aa10.91□□□□□ -0.66
DDX41-208ENST00000507955 IGHV4-31P0DP07 118 aa10.9□□□□□ -0.66
DDX41-208ENST00000507955 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
DDX41-208ENST00000507955 HHLA3Q9XRX5 114 aa10.9□□□□□ -0.66
DDX41-208ENST00000507955 C18orf65Q6ZTR6 163 aa10.9□□□□□ -0.66
DDX41-208ENST00000507955 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 BRI3O95415 125 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 PPBPP02775 128 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 FCER1GP30273 86 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 SYNJ2BPP57105 145 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 HSD52Q0P140 79 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 UFSP1Q6NVU6 142 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 MUC4Q99102 2169 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 H3BRM9 83 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 H3BUT2 72 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 OVOL1O14753 267 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
DDX41-208ENST00000507955 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 Q5PR19 223 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
DDX41-208ENST00000507955 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 TMEM158Q8WZ71 300 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 RAB37Q96AX2 223 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
DDX41-208ENST00000507955 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
DDX41-208ENST00000507955 NRACQ8N912 160 aa10.88□□□□□ -0.67
DDX41-208ENST00000507955 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
DDX41-208ENST00000507955 Q96MF0 132 aa10.88□□□□□ -0.67
DDX41-208ENST00000507955 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
DDX41-208ENST00000507955 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 IGHV4OR15-8A0A075B7B6 117 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 A0A087WW49 117 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 TRAV21A0A0B4J279 112 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 SIVA1O15304 175 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 A6NDN8 102 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 SAP30O75446 220 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 PRSS1P07477 247 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 FAM19A4Q96LR4 140 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 FOXC2Q99958 501 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 JPT2Q9H910 190 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 MTORP42345 2549 aa10.87□□□□□ -0.67
DDX41-208ENST00000507955 WNK1Q9H4A3 2382 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 SMIM15Q7Z3B0 74 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 Q8N8P6 123 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
DDX41-208ENST00000507955 ZNF702PQ9H963 129 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 RNASE3P12724 160 aaKnown RBP10.86□□□□□ -0.67
DDX41-208ENST00000507955 DEFB113Q30KQ7 82 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 Q6YL49 198 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
DDX41-208ENST00000507955 FXYD2P54710 66 aa10.85□□□□□ -0.67
DDX41-208ENST00000507955 LENEPQ9Y5L5 61 aa10.85□□□□□ -0.67
DDX41-208ENST00000507955 MGPP08493 103 aa10.85□□□□□ -0.67
DDX41-208ENST00000507955 ASIPP42127 132 aa10.85□□□□□ -0.67
DDX41-208ENST00000507955 HELZ2Q9BYK8 2649 aaKnown RBP10.84□□□□□ -0.67
DDX41-208ENST00000507955 J3QLI3 93 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 IGKCP01834 107 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 K7EMI3 77 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 K7EP34 96 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
DDX41-208ENST00000507955 IGHV4-4A0A075B6R2 117 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 K7EMT4 169 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
DDX41-208ENST00000507955 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 FSHBP01225 129 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
DDX41-208ENST00000507955 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
DDX41-208ENST00000507955 K7ERJ3 54 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 GCSHP23434 173 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 SLURP1P55000 103 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 RASL10AQ92737 203 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 TMEM160Q9NX00 188 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
DDX41-208ENST00000507955 TRBV25-1A0A075B6N4 114 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 DPM2O94777 84 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 MAPKAPK5-AS1Q8N8E1 139 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 A0A087WWL8 130 aa10.81□□□□□ -0.68
DDX41-208ENST00000507955 KLLNB2CW77 178 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms