RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 IGHV3-33P01772 117 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 TYMSP04818 313 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 IGHV3-30-3P0DP02 117 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 IGHV3-30-5P0DP03 117 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 GATA1P15976 413 aaPredicted RBP3.88□□□□□ -1.79
GYPB-204ENST00000504951 UBE2L3P68036 154 aaKnown RBP3.88□□□□□ -1.79
GYPB-204ENST00000504951 CNPY1Q3B7I2 92 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 LRRC37A5PQ49AS3 106 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 FAM159AQ6UWV7 190 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 DPPA3Q6W0C5 159 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 SLC25A29Q8N8R3 303 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 NHLRC2Q8NBF2 726 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 ATP6V0E2Q8NHE4 81 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 HYLS1Q96M11 299 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 Q9UF83 564 aa3.88□□□□□ -1.79
GYPB-204ENST00000504951 TRGV11A0A075B6L2 103 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 LECT2O14960 151 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 SEC11BP0C7V7 166 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 CSN1S1P47710 185 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 PPT1P50897 306 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 ZNF80P51504 273 aaPredicted RBP3.87□□□□□ -1.79
GYPB-204ENST00000504951 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 GNG5P63218 68 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 TMEM75Q8N9X5 138 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 OR10G9Q8NGN4 311 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 RMI2Q96E14 147 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 DNAJC30Q96LL9 226 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 SGK494Q96LW2 274 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 RPH3ALQ9UNE2 315 aa3.87□□□□□ -1.79
GYPB-204ENST00000504951 A0A0D9SG52 128 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 FAM240BA0A1B0GVZ2 78 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 TRBV6-4A0A1B0GX49 114 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 PGPA6NDG6 321 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 HMGB3O15347 200 aaKnown RBP3.86□□□□□ -1.79
GYPB-204ENST00000504951 H2BFSP57053 126 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 CIRBPQ14011 172 aaKnown RBP3.86□□□□□ -1.79
GYPB-204ENST00000504951 ZNF876PQ49A33 203 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 OR10J3Q5JRS4 329 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 FFAR4Q5NUL3 377 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 CFAP126Q5VTH2 177 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 ATRAIDQ6UW56 229 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 GOLT1AQ6ZVE7 132 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 TMED6Q8WW62 240 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 SMIM3Q9BZL3 60 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 GTSF1LQ9H1H1 148 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 WFDC1Q9HC57 220 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 OTORQ9NRC9 128 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 MBD2Q9UBB5 411 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 LENEPQ9Y5L5 61 aa3.86□□□□□ -1.79
GYPB-204ENST00000504951 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
GYPB-204ENST00000504951 TRAV21A0A0B4J279 112 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 A0A0U1RQV1 116 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 PGPEP1LA6NFU8 196 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 FBLL1A6NHQ2 334 aaKnown RBP3.85□□□□□ -1.79
GYPB-204ENST00000504951 GGTLC3B5MD39 225 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 KHDC3LQ587J8 217 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 DAZ4Q86SG3 579 aaKnown RBP3.85□□□□□ -1.79
GYPB-204ENST00000504951 C9orf163Q8N9P6 203 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 ATP5SQ99766 215 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 NMES1Q9C002 83 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 SDF2L1Q9HCN8 221 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 TREM1Q9NP99 234 aa3.85□□□□□ -1.79
GYPB-204ENST00000504951 DAZ3Q9NR90 486 aaKnown RBP3.85□□□□□ -1.79
GYPB-204ENST00000504951 A0A087WWC5 75 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 A0A0J9YXV3 536 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 C17orf112F2Z3M2 114 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 LINC00694P0DN24 101 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 RNASE3P12724 160 aaKnown RBP3.84□□□□□ -1.79
GYPB-204ENST00000504951 RAB2AP61019 212 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 IFITM3Q01628 133 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 RHOHQ15669 191 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 ZNF506Q5JVG8 444 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 CMTM2Q8TAZ6 248 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 PPP1R1CQ8WVI7 109 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 PTH2Q96A98 100 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 RNF185Q96GF1 192 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 CCDC32Q9BV29 185 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 SAMD10Q9BYL1 202 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 JPT2Q9H910 190 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 KCNIP2Q9NS61 270 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 HSPB11Q9Y547 144 aa3.84□□□□□ -1.79
GYPB-204ENST00000504951 IGKV3D-20A0A0C4DH25 116 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 MPC2O95563 127 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GCGP01275 180 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 TCRAP04437 139 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 ARL14EPLP0DKL9 152 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 TAS2R45P59539 299 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GAGE1Q13065 139 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GAGE4Q13068 117 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GAGE5Q13069 117 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 GAGE13Q4V321 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms