RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 LGALS9BQ3B8N2 356 aa11.51□□□□□ -0.57
SNCAIP-207ENST00000504884 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
SNCAIP-207ENST00000504884 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
SNCAIP-207ENST00000504884 CDKN1BP46527 198 aa11.5□□□□□ -0.57
SNCAIP-207ENST00000504884 KHDC1LQ5JSQ8 128 aa11.5□□□□□ -0.57
SNCAIP-207ENST00000504884 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 NXPH4O95158 308 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 AP1S3Q96PC3 154 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 SPRY2O43597 315 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 CD7P09564 240 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 KLHL30-AS1Q8NEE0 82 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 PMCHL2Q9BQD1 86 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 YAE1D1Q9NRH1 226 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
SNCAIP-207ENST00000504884 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
SNCAIP-207ENST00000504884 LAGE3Q14657 143 aa11.48□□□□□ -0.57
SNCAIP-207ENST00000504884 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
SNCAIP-207ENST00000504884 ITPR3Q14573 2671 aa11.48□□□□□ -0.57
SNCAIP-207ENST00000504884 CHD6Q8TD26 2715 aa11.47□□□□□ -0.57
SNCAIP-207ENST00000504884 PPP1R17O96001 155 aa11.47□□□□□ -0.57
SNCAIP-207ENST00000504884 DLX4Q92988 240 aaPredicted RBP11.47□□□□□ -0.57
SNCAIP-207ENST00000504884 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
SNCAIP-207ENST00000504884 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
SNCAIP-207ENST00000504884 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
SNCAIP-207ENST00000504884 POM121L12Q8N7R1 296 aa11.46□□□□□ -0.57
SNCAIP-207ENST00000504884 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
SNCAIP-207ENST00000504884 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
SNCAIP-207ENST00000504884 SMIM17P0DL12 118 aa11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 SCGB2A2Q13296 93 aa11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 SPINK13Q1W4C9 94 aa11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 RASL10AQ92737 203 aa11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 SMIM2Q9BVW6 85 aa11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 KMT2BQ9UMN6 2715 aaPredicted RBP11.46□□□□□ -0.58
SNCAIP-207ENST00000504884 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 MGPP08493 103 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
SNCAIP-207ENST00000504884 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 K7EMI3 77 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 ATP5LO75964 103 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 DEFB131AP59861 70 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 TCAPO15273 167 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 BATFQ16520 125 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 DEFB114Q30KQ6 69 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
SNCAIP-207ENST00000504884 A8MTW9 85 aa11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 LINC00315P59091 139 aa11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 Q8N1Y9 231 aa11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 SYT8Q8NBV8 401 aa11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 PDZD2O15018 2839 aa11.43□□□□□ -0.58
SNCAIP-207ENST00000504884 PRSS1P07477 247 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 HLA-DRB4P13762 266 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 ORMDL2Q53FV1 153 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 HLA-DRB4X5D2U9 266 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 MUC4Q99102 2169 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 H3BMM0 161 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 NUDT3O95989 172 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 RAX2Q96IS3 184 aa11.42□□□□□ -0.58
SNCAIP-207ENST00000504884 CCDC168Q8NDH2 2452 aa11.41□□□□□ -0.58
SNCAIP-207ENST00000504884 COX8AP10176 69 aa11.41□□□□□ -0.58
SNCAIP-207ENST00000504884 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 SPAG8Q99932 426 aaPredicted RBP11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 AGRNO00468 2067 aa11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 SORL1Q92673 2214 aa11.4□□□□□ -0.58
SNCAIP-207ENST00000504884 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 CCL24O00175 119 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 CD28P10747 220 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 FHL3Q13643 280 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 ODF1Q14990 250 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 ZMAT4Q9H898 229 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 JPT2Q9H910 190 aa11.4□□□□□ -0.59
SNCAIP-207ENST00000504884 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 HIST2H2BDQ6DRA6 164 aa11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 LINC01006Q8NI28 216 aa11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 ZNF418Q8TF45 676 aaPredicted RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
SNCAIP-207ENST00000504884 MYO9AB2RTY4 2548 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms