RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RITA1Q96K30 269 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 MED13Q9UHV7 2174 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 J3QLI3 93 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 GHRHP01286 108 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 TM2D2Q9BX73 214 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 IGF2-ASQ6U949 168 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 SPANXB1Q9NS25 103 aaPredicted RBP13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 WI2-2373I1.2A0A1W2PRP0 233 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 Q8N7P7 452 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 SAA4P35542 130 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 SPANXCQ9NY87 97 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 FOXE3Q13461 319 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 GATD1Q8NB37 220 aa13.43□□□□□ -0.26
HMGXB3-201ENST00000502717 SRSF2Q01130 221 aaKnown RBP13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 G3V318 75 aa13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 UBE2E1P51965 193 aa13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 RPL36AP83881 106 aaKnown RBP13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 RPL36ALQ969Q0 106 aaKnown RBP13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 MUC22E2RYF6 1773 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 PCDH15Q96QU1 1955 aa13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 DAZAP2Q15038 168 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-201ENST00000502717 ZGRF1Q86YA3 2104 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 C2orf91Q6ZV80 131 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 Q71RC1 249 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 MED12LQ86YW9 2145 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 TEX22C9J3V5 150 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 OVOL3O00110 214 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 NDUFA4O00483 81 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 LY6HO94772 140 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 RHOHQ15669 191 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 KLHL30-AS1Q8NEE0 82 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 WT1P19544 449 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 SMIM20Q8N5G0 67 aa13.41□□□□□ -0.26
HMGXB3-201ENST00000502717 PAX4O43316 350 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 ACYP1P07311 99 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 PIFOQ8TCI5 191 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 TNCP24821 2201 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 TOMM6Q96B49 74 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 LINC00574Q9H8X3 128 aa13.4□□□□□ -0.26
HMGXB3-201ENST00000502717 A4D1N5 150 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 C1orf159Q96HA4 380 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 MYCNOSP40205 109 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 PRB1P04280 392 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 LINC01620Q4KN68 170 aa13.39□□□□□ -0.27
HMGXB3-201ENST00000502717 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 NCKAP5O14513 1909 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 A0A1W2PNU3 283 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 RHODO00212 210 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 NPBQ8NG41 125 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 NCOR2Q9Y618 2525 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 Q6ZUT4 128 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 CITED1Q99966 193 aa13.38□□□□□ -0.27
HMGXB3-201ENST00000502717 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 TRAV13-1A0A0B4J241 112 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 CTSGP08311 255 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 ZNF625Q96I27 306 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 MAPK1IP1LQ8NDC0 245 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 BAALCQ8WXS3 180 aa13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 C1orf229Q6ZS94 237 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-201ENST00000502717 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
HMGXB3-201ENST00000502717 GNRH2O43555 120 aa13.36□□□□□ -0.27
HMGXB3-201ENST00000502717 SOCS3O14543 225 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 BUB3O43684 328 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 MUSTN1Q8IVN3 82 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 PTH2Q96A98 100 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 ATG2AQ2TAZ0 1938 aa13.35□□□□□ -0.27
HMGXB3-201ENST00000502717 PRSS47A8MTI9 375 aa13.34□□□□□ -0.27
HMGXB3-201ENST00000502717 TRACP01848 142 aa13.34□□□□□ -0.27
HMGXB3-201ENST00000502717 TRGV4A0A0C4DH28 118 aa13.34□□□□□ -0.27
HMGXB3-201ENST00000502717 DKK4Q9UBT3 224 aa13.34□□□□□ -0.27
HMGXB3-201ENST00000502717 U3KQK5 164 aa13.34□□□□□ -0.27
HMGXB3-201ENST00000502717 IGLV1-47P01700 117 aa13.33□□□□□ -0.27
HMGXB3-201ENST00000502717 IGLC6P0CF74 106 aa13.33□□□□□ -0.27
HMGXB3-201ENST00000502717 RNF183Q96D59 192 aa13.33□□□□□ -0.27
HMGXB3-201ENST00000502717 SPINK13Q1W4C9 94 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 NDUFA11Q86Y39 141 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 TMEM126AQ9H061 195 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 PRAC2D3DTV9 90 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 ARFGEF3Q5TH69 2177 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 MSMPQ1L6U9 139 aa13.33□□□□□ -0.28
HMGXB3-201ENST00000502717 KLK9Q9UKQ9 250 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 PTPRSQ13332 1948 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 MT-ATP8P03928 68 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 TIMM17AQ99595 171 aa13.32□□□□□ -0.28
HMGXB3-201ENST00000502717 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 TRBV10-2A0A0K0K1G8 114 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 C11orf86A6NJI1 115 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms