RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 CST9LP1Q5W188 147 aa10.97□□□□□ -0.65
NR1H3-227ENST00000498548 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
NR1H3-227ENST00000498548 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
NR1H3-227ENST00000498548 SLC25A29Q8N8R3 303 aa10.96□□□□□ -0.65
NR1H3-227ENST00000498548 HIST1H2BAQ96A08 127 aa10.96□□□□□ -0.65
NR1H3-227ENST00000498548 ZC2HC1AQ96GY0 325 aa10.96□□□□□ -0.65
NR1H3-227ENST00000498548 TXNDC17Q9BRA2 123 aa10.96□□□□□ -0.65
NR1H3-227ENST00000498548 ZNF471Q9BX82 626 aaPredicted RBP10.96□□□□□ -0.65
NR1H3-227ENST00000498548 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
NR1H3-227ENST00000498548 PAGE4O60829 102 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 S100A4P26447 101 aaKnown RBP10.95□□□□□ -0.66
NR1H3-227ENST00000498548 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 ZNF345Q14585 488 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 TEX261Q6UWH6 196 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 TMUB2Q71RG4 321 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 FAM213BQ8TBF2 198 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
NR1H3-227ENST00000498548 RYR1P21817 5038 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 A0A0D9SG52 128 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 GRIFINA4D1Z8 144 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 B4DEV8 164 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 M0R036 132 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 ATP6V1G1O75348 118 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
NR1H3-227ENST00000498548 Q6ZSN1 163 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 JPT2Q9H910 190 aa10.94□□□□□ -0.66
NR1H3-227ENST00000498548 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 BCL2L11O43521 198 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 SH2D1AO60880 128 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 BTF3P20290 206 aaKnown RBP10.93□□□□□ -0.66
NR1H3-227ENST00000498548 ASIPP42127 132 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 UBE2G1P62253 170 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 PTH2Q96A98 100 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 PRADC1Q9BSG0 188 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 HSPG2P98160 4391 aa10.93□□□□□ -0.66
NR1H3-227ENST00000498548 TRAV9-2A0A087WT02 112 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 KRBOX1C9JBD0 128 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 H3BVH4 76 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 SAMD10Q9BYL1 202 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 PARLQ9H300 379 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 ZFP30Q9Y2G7 519 aa10.92□□□□□ -0.66
NR1H3-227ENST00000498548 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 CIDEAO60543 219 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 ARMS2P0C7Q2 107 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 EVI2AP22794 236 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 AKR1C3P42330 323 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 RHOHQ15669 191 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
NR1H3-227ENST00000498548 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 FAM162BQ5T6X4 162 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 SH2D6Q7Z4S9 175 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 SLC51BQ86UW2 128 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 SLC7A5P1Q8MH63 180 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 IL36BQ9NZH7 164 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 MSRB1Q9NZV6 116 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 Q9UF83 564 aa10.9□□□□□ -0.66
NR1H3-227ENST00000498548 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 UMAD1C9J7I0 102 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 LTAP01374 205 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 CRYGDP07320 174 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 COX8CQ7Z4L0 72 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 KRTAP4-5Q9BYR2 181 aa10.89□□□□□ -0.67
NR1H3-227ENST00000498548 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
NR1H3-227ENST00000498548 IGHV3-38A0A0C4DH36 116 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 GAGE12JA6NER3 117 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 A8MWV9 139 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 H2AFB1P0C5Y9 115 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 MGST1P10620 155 aaKnown RBP10.88□□□□□ -0.67
NR1H3-227ENST00000498548 GAGE1Q13065 139 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 GAGE4Q13068 117 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 GAGE5Q13069 117 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 OR10J3Q5JRS4 329 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 NFE4Q86UQ8 179 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
NR1H3-227ENST00000498548 ATP6V0E2Q8NHE4 81 aa10.88□□□□□ -0.67
NR1H3-227ENST00000498548 IGHV3-30P01768 117 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 IGHV3-33P01772 117 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 IGHV3-30-3P0DP02 117 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 IGHV3-30-5P0DP03 117 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 TIRAPP58753 221 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 CCL20P78556 96 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 CLLU1Q5K131 121 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 UFSP1Q6NVU6 142 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
NR1H3-227ENST00000498548 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
NR1H3-227ENST00000498548 LINC00862A6NCI5 91 aa10.86□□□□□ -0.67
NR1H3-227ENST00000498548 M0R381 172 aa10.86□□□□□ -0.67
NR1H3-227ENST00000498548 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
NR1H3-227ENST00000498548 ERVFC1-1P60608 527 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms